RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CXCL2P19875 107 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 CFPP27918 469 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 SFTPDP35247 375 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 H2BFSP57053 126 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 RAP1BP61224 184 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 RAP1AP62834 184 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 GLT8D1Q68CQ7 371 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 GALNT16Q8N428 558 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 CLEC1AQ8NC01 280 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 ACBD4Q8NC06 268 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 SEH1LQ96EE3 360 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 RBP7Q96R05 134 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 UTP23Q9BRU9 249 aaKnown RBP21.22■□□□□ 0.99
CDK9-201ENST00000373264 A0A1W2PPL8 197 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 ZNF28P17035 718 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 ZNF41P51814 821 aaPredicted RBP21.22■□□□□ 0.99
CDK9-201ENST00000373264 RBMS2Q15434 407 aaKnown RBP21.22■□□□□ 0.99
CDK9-201ENST00000373264 DMRTC1Q5HYR2 192 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 DCAF12L2Q5VW00 463 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 CFAP77Q6ZQR2 320 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 MUC20Q8N307 709 aaPredicted RBP21.22■□□□□ 0.99
CDK9-201ENST00000373264 PTGES2Q9H7Z7 377 aa21.22■□□□□ 0.99
CDK9-201ENST00000373264 SMAD9O15198 467 aaKnown RBP21.21■□□□□ 0.99
CDK9-201ENST00000373264 ACSM4P0C7M7 580 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 SLC2A1P11166 492 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 SCAND1P57086 179 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 PCK2Q16822 640 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 PHF19Q5T6S3 580 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 LYSMD4Q5XG99 296 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.21■□□□□ 0.99
CDK9-201ENST00000373264 SAP25Q8TEE9 199 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 FAM46BQ96A09 425 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 SLAMF6Q96DU3 332 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 TINAGL1Q9GZM7 467 aaPredicted RBP21.21■□□□□ 0.99
CDK9-201ENST00000373264 EMC3Q9P0I2 261 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 SIT1Q9Y3P8 196 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 CSF1P09603 554 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 NR0B2Q15466 257 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 C5orf46Q6UWT4 87 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 GPX8Q8TED1 209 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 ADAT3Q96EY9 351 aaPredicted RBP21.21■□□□□ 0.99
CDK9-201ENST00000373264 SEC61A2Q9H9S3 476 aa21.21■□□□□ 0.99
CDK9-201ENST00000373264 TEX51A0A1B0GUA7 166 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 TMEM235A6NFC5 223 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 TTRP02766 147 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 HLA-BQ31612 363 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 STEAP1BQ6NZ63 245 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 OR4S1Q8NGB4 309 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 C15orf40Q8WUR7 153 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 RNF133Q8WVZ7 376 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 SPACA5Q96QH8 159 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 OR5B2Q96R09 309 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 FAM206AQ9NX38 181 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 PTTG3PQ9NZH4 202 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 TMA7Q9Y2S6 64 aaKnown RBP21.2■□□□□ 0.98
CDK9-201ENST00000373264 RHBDD3Q9Y3P4 386 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 WIF1Q9Y5W5 379 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 OR2M5A3KFT3 312 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 CSN2P05814 226 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 AKAIN1P0CW23 69 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 P2RX3P56373 397 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 ELMOD2Q8IZ81 293 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 GABRG1Q8N1C3 465 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 OR52N4Q8NGI2 321 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 B3GNT4Q9C0J1 378 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 ALKBH4Q9NXW9 302 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 B3GNT2Q9NY97 397 aa21.2■□□□□ 0.98
CDK9-201ENST00000373264 TOX3O15405 576 aaPredicted RBP21.19■□□□□ 0.98
CDK9-201ENST00000373264 ZNF208O43345 1280 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 CPN1P15169 458 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 FSTP19883 344 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 GNALP38405 381 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 FAM109AQ8N4B1 249 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 SPICQ8N5J4 248 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 ELMOD3Q96FG2 381 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 RASL10BQ96S79 203 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 CNTD2Q9H8S5 307 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 RPH3AQ9Y2J0 694 aaPredicted RBP21.19■□□□□ 0.98
CDK9-201ENST00000373264 RGS11O94810 467 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 P2RY4P51582 365 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 MECP2P51608 486 aaKnown RBP21.19■□□□□ 0.98
CDK9-201ENST00000373264 SLC22A6Q4U2R8 563 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 DNM1P34Q6PK57 102 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 RNF138Q8WVD3 245 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 MRPL13Q9BYD1 178 aaKnown RBP21.19■□□□□ 0.98
CDK9-201ENST00000373264 CYB5R1Q9UHQ9 305 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 SLC5A6Q9Y289 635 aa21.19■□□□□ 0.98
CDK9-201ENST00000373264 ZFAND5O76080 213 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 IL5P05113 134 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 ACHEP22303 614 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 FAUP35544 74 aaKnown RBP21.18■□□□□ 0.98
CDK9-201ENST00000373264 PMPCAQ10713 525 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 C17orf107Q6ZR85 190 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 PPP1R3BQ86XI6 285 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 LYPD6Q86Y78 171 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 WDSUB1Q8N9V3 476 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 OR6M1Q8NGM8 313 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 OR6N1Q8NGY5 312 aa21.18■□□□□ 0.98
CDK9-201ENST00000373264 GPN1Q9HCN4 374 aaPredicted RBP21.18■□□□□ 0.98
CDK9-201ENST00000373264 PRDM6Q9NQX0 595 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms