RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 SSBP1Q04837 148 aaKnown RBP13.31□□□□□ -0.28
COL9A2-202ENST00000372748 EIF2B1Q14232 305 aaKnown RBP13.31□□□□□ -0.28
COL9A2-202ENST00000372748 LPCAT3Q6P1A2 487 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 TAF8Q7Z7C8 310 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 ARMC10Q8N2F6 343 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 OR10R2Q8NGX6 335 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 MRGPRFQ96AM1 343 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 EDEM2Q9BV94 578 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 SLC19A3Q9BZV2 496 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 CYB5R1Q9UHQ9 305 aa13.31□□□□□ -0.28
COL9A2-202ENST00000372748 C17orf51A8MQB3 221 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 FARS2O95363 451 aaKnown RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 RENP00797 406 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ASAH2BP0C7U1 165 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 SLC17A1Q14916 467 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 EEF1A1P5Q5VTE0 462 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 C1QL3Q5VWW1 255 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 TMEM184AQ6ZMB5 413 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 LYG2Q86SG7 212 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ATG4DQ86TL0 474 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 PARGQ86W56 976 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ADAD2Q8NCV1 583 aaKnown RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 OR4A4PQ8NGN8 299 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ASB5Q8WWX0 329 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 DCUN1D4Q92564 292 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 SLC25A44Q96H78 314 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 G6PC3Q9BUM1 346 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 SEMA6CQ9H3T2 930 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 CSAG2Q9Y5P2 127 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 TMEM14AQ9Y6G1 99 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 C9orf170A2RU37 121 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 PRSS44E7EML9 344 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 HPGDP15428 266 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 RNASE10Q5GAN6 216 aaKnown RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 RXFP4Q8TDU9 374 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ELP5Q8TE02 316 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 FAM46BQ96A09 425 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 PIK3IP1Q96FE7 263 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 OR8B4Q96RC9 309 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 CKLFQ9UBR5 152 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 LMX1BO60663 402 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ERCC1P07992 297 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 APEHP13798 732 aaKnown RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 PDZK1IP1Q13113 114 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 AKIRIN2Q53H80 203 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 NKAPLQ5M9Q1 402 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 DHRS7BQ6IAN0 325 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 WBP2NLQ6ICG8 309 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 GLYATL2Q8WU03 294 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 NUDCD2Q8WVJ2 157 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 ROBO4Q8WZ75 1007 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 TAAR8Q969N4 342 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 FOXRED1Q96CU9 486 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-202ENST00000372748 PHB2Q99623 299 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 UQCC2Q9BRT2 126 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 CRB3Q9BUF7 120 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 SLC22A11Q9NSA0 550 aa13.3□□□□□ -0.28
COL9A2-202ENST00000372748 TCRBV21S2A2A0A5A6 115 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 TNFRSF10CO14798 259 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 TNFP01375 233 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 MAOAP21397 527 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 PPM1FP49593 454 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 SRSF4Q08170 494 aaKnown RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 HYAL1Q12794 435 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 ZNF813Q6ZN06 617 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 MARCH3Q86UD3 253 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 SLC25A42Q86VD7 318 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 OR1M1Q8NGA1 313 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 MEX3AA1L020 520 aaKnown RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 CD74P04233 296 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 AKT2P31751 481 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 RORAP35398 523 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 AIMP2Q13155 320 aaKnown RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 MED25Q71SY5 747 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 ADGRE4PQ86SQ3 457 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 RTN4RL2Q86UN3 420 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 FJX1Q86VR8 437 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 OOSP2Q86WS3 158 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 CHST4Q8NCG5 386 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 MITD1Q8WV92 249 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 ARL11Q969Q4 196 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 RRNAD1Q96FB5 475 aaKnown RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 CNTNAP3BQ96NU0 1288 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
COL9A2-202ENST00000372748 CHMP1AQ9HD42 196 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 PRMT8Q9NR22 394 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-202ENST00000372748 WIPF3A6NGB9 483 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 FGF16O43320 207 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 STK17BO94768 372 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 APOC1P02654 83 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 CD2P06729 351 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 TACR3P29371 465 aa13.28□□□□□ -0.28
COL9A2-202ENST00000372748 DCDP81605 110 aaKnown RBP13.28□□□□□ -0.28
COL9A2-202ENST00000372748 MICBQ29980 383 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms