RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CPEB2Q7Z5Q1 589 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 POM121Q96HA1 1249 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM38AQ9H6F2 299 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PURGQ9UJV8 347 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM218A2RU14 115 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 CLEC2LP0C7M8 214 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PIPP12273 146 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 RHOBP62745 196 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRSS36Q5K4E3 855 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC25A46Q96AG3 418 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PDCD1LG2Q9BQ51 273 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 SERPINA2P20848 420 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 CTSSP25774 331 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 HTR2CP28335 458 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 SAMD13Q5VXD3 122 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR7E24Q6IFN5 339 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 DTWD2Q8NBA8 298 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRO1933Q9H354 126 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 NCOR1P1Q9H4R4 102 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 NOX4Q9NPH5 578 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC35D1Q9NTN3 355 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 KLF13Q9Y2Y9 288 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 C2orf72A6NCS6 295 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ACTL6BO94805 426 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 HBE1P02100 147 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR8G3PP0DMU2 310 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 GFERP55789 205 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ISL1P61371 349 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MORN4Q8NDC4 146 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MVB12AQ96EY5 273 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 REEP6Q96HR9 211 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MBOAT4Q96T53 435 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PSMG3Q9BT73 122 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 A0A1W2PRV1 198 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 LILRA5A6NI73 299 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 GPR171O14626 319 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TERTO14746 1132 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 RAB29O14966 203 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 CISD3P0C7P0 127 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MYF5P13349 255 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TAS2R30P59541 319 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 WDR73Q6P4I2 378 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 FAM57BQ71RH2 274 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC35D2Q76EJ3 337 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ABI3BPQ7Z7G0 1075 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR11L1Q8NGX0 322 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR51B4Q9Y5P0 310 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRRG2O14669 202 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PDE6DO43924 150 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 FZD6O60353 706 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 EIF4E2O60573 245 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PMS2P2O95744 297 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 CCR6P51684 374 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 FOXB2Q5VYV0 432 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ANGPTL5Q86XS5 388 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRR18Q8N4B5 295 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 NANOGP1Q8N7R0 232 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 C22orf15Q8WYQ4 148 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PIGCQ92535 297 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLCO5A1Q9H2Y9 848 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ANKRD19PQ9H560 264 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TRABD2BA6NFA1 517 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ELK1P19419 428 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 RAB5AP20339 215 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TAGLN2P37802 199 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 ATP1B3P54709 279 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 CLDN12P56749 244 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TCTAP57738 103 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM183BQ1AE95 376 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 LEMD1Q68G75 181 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 B3GLCTQ6Y288 498 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 CA13Q8N1Q1 262 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 TP53RKQ96S44 253 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MRPL13Q9BYD1 178 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 GAB2Q9UQC2 676 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 LOC102723971A0A1B0GUV8 181 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR6C68A6NDL8 312 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 SYT5O00445 386 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MSTNO14793 375 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 PIAS2O75928 621 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 GP2P55259 537 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 GABREP78334 506 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 RBM39Q14498 530 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 COX20Q5RI15 118 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 STEAP1BQ6NZ63 245 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 KATNB1Q9BVA0 655 aa12.17□□□□□ -0.46
RAPGEF1-201ENST00000372189 MFRPQ9BY79 579 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms