RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PCSK6P29122 969 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 IDH3GP51553 393 aaPredicted RBP13.86□□□□□ -0.19
PFDN4-201ENST00000371419 SLC25A1P53007 311 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 EFNB1P98172 346 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 GLO1Q04760 184 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 DYNC1I2Q13409 638 aaKnown RBP13.86□□□□□ -0.19
PFDN4-201ENST00000371419 IRF3Q14653 427 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 TMEM53Q6P2H8 277 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 CDC20BQ86Y33 519 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 YIPF6Q96EC8 236 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 PLEKHA8Q96JA3 519 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 NMNAT2Q9BZQ4 307 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 FBXL3Q9UKT7 428 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 ROS1P08922 2347 aa13.86□□□□□ -0.19
PFDN4-201ENST00000371419 NOTCH2Q04721 2471 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 C12orf71A8MTZ7 269 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 ABCD4O14678 606 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 TLX2O43763 284 aaPredicted RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 PRKYO43930 277 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 SCG5P05408 212 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 MMP7P09237 267 aaPredicted RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 PAICSP22234 425 aaKnown RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 C21orf33P30042 268 aaPredicted RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 PCBD1P61457 104 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 LSM6P62312 80 aaKnown RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 ENDOGQ14249 297 aaKnown RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 KCNMB1Q16558 191 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 KLHL22Q53GT1 634 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 RNLSQ5VYX0 342 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 ZNF704Q6ZNC4 412 aaPredicted RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 PROKR2Q8NFJ6 384 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 OR9Q1Q8NGQ5 310 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 C11orf40Q8WZ69 217 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 FBXO17Q96EF6 278 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 TMEM80Q96HE8 168 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 RADILQ96JH8 1075 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 WACQ9BTA9 647 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 ZNF416Q9BWM5 594 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 NAA50Q9GZZ1 169 aaKnown RBP13.85□□□□□ -0.19
PFDN4-201ENST00000371419 EMC7Q9NPA0 242 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 DNAJC27Q9NZQ0 273 aa13.85□□□□□ -0.19
PFDN4-201ENST00000371419 A0A1W2PPR1 153 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 FAM171A2A8MVW0 826 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 GABARAPO95166 117 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 ATE1O95260 518 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 MPZL1O95297 269 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 PLAUP00749 431 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 CELA3BP08861 270 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 CECR9P0C854 216 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 GAAP10253 952 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 DBTP11182 482 aaKnown RBP13.84□□□□□ -0.19
PFDN4-201ENST00000371419 ZNF14P17017 642 aaPredicted RBP13.84□□□□□ -0.19
PFDN4-201ENST00000371419 PYCR1P32322 319 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 KRTAP10-9P60411 292 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 HSF2Q03933 536 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 DBPQ10586 325 aaPredicted RBP13.84□□□□□ -0.19
PFDN4-201ENST00000371419 ADAM5Q6NVV9 412 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 ZNF367Q7RTV3 350 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 SYT9Q86SS6 491 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 IL17RDQ8NFM7 739 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 SLC26A10Q8NG04 563 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 RFKQ969G6 155 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 OTULINQ96BN8 352 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 ZNF75AQ96N20 296 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 TIMM10BQ9Y5J6 103 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 SPG11Q96JI7 2443 aa13.84□□□□□ -0.19
PFDN4-201ENST00000371419 HEATR1Q9H583 2144 aaKnown RBP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 FAM183AA6NL82 134 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 PRR23D1E9PI22 279 aaPredicted RBP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 SLC22A1O15245 554 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 PRODHO43272 600 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 GPANK1O95872 356 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 HLA-DQA2P01906 255 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 CRYAAP02489 173 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 SERPINA5P05154 406 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 GYPBP06028 91 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 LCKP06239 509 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 PRR23D2P0DMB1 279 aaPredicted RBP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 ZNF32P17041 273 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 SPI1P17947 270 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 NAAAQ02083 359 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 PLP2Q04941 152 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 ZNF91Q05481 1191 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 SLC22A25Q6T423 547 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 MYPOPQ86VE0 399 aaPredicted RBP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 PTP4A1Q93096 173 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 ZNF582Q96NG8 517 aaPredicted RBP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 KCNS3Q9BQ31 491 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 PLEKHF2Q9H8W4 249 aa13.83□□□□□ -0.2
PFDN4-201ENST00000371419 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.83□□□□□ -0.2
PFDN4-201ENST00000371419 POLQO75417 2590 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 AKAP6Q13023 2319 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 A0A1W2PPW3 197 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 PTHP01270 115 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 TFP02787 698 aa13.82□□□□□ -0.2
PFDN4-201ENST00000371419 CLUP10909 449 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms