RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 SIX6O95475 246 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 CPEP16870 476 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 HAAOP46952 286 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 PPT1P50897 306 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 TBCEQ15813 527 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 WIPI1Q5MNZ9 446 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 SIAH3Q8IW03 269 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ZNF439Q8NDP4 499 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 CDX2Q99626 313 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 C19orf53Q9UNZ5 99 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 M0R135 149 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 GPR37O15354 613 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 NRASP01111 189 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 CBR1P16152 277 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 BMP5P22003 454 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 RPL18Q07020 188 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 CLVS2Q5SYC1 327 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 BTLAQ7Z6A9 289 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 AKR7LQ8NHP1 331 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ZNF799Q96GE5 643 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ALKBH3Q96Q83 286 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 PSORS1C1Q9UIG5 152 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 C7orf72A4D263 438 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 GPM6AP51674 278 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 DLX5P56178 289 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 SELENBP1Q13228 472 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 TMEM179BQ7Z7N9 219 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 PLPP6Q8IY26 295 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 CISD2Q8N5K1 135 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 OR2Z1Q8NG97 314 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 GPR84Q9NQS5 396 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 MRPL22Q9NWU5 206 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 WDR1O75083 606 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 UBBP0CG47 229 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 UBE2IP63279 158 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 RTL8BQ17RB0 113 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ZMAT1Q5H9K5 638 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 THEM4Q5T1C6 240 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 RGS7BPQ6MZT1 257 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 TMEM99Q8N816 258 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 OR52A5Q9H2C5 316 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 TMEM38AQ9H6F2 299 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ALS2Q96Q42 1657 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 AGAP14A8MT82 685 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 FCMRO60667 390 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 TRIP6Q15654 476 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 IAH1Q2TAA2 248 aaPredicted RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 FBXL14Q8N1E6 418 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 HSD17B11Q8NBQ5 300 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 PLPP5Q8NEB5 264 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 OR13C5Q8NGS8 318 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 BCL7BQ9BQE9 202 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 ESRP2Q9H6T0 727 aaKnown RBP7.78□□□□□ -1.16
ABCA4-201ENST00000370225 PLEKHF2Q9H8W4 249 aa7.78□□□□□ -1.16
ABCA4-201ENST00000370225 PKD1L3Q7Z443 1732 aa7.77□□□□□ -1.16
ABCA4-201ENST00000370225 SSC5DA1L4H1 1573 aa7.77□□□□□ -1.16
ABCA4-201ENST00000370225 RPS10-NUDT3A0A1W2PQS6 291 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 BHLHE40O14503 412 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 RPS10P46783 165 aaKnown RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 ETV1P50549 477 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 P2RX3P56373 397 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 FLI1Q01543 452 aaPredicted RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 TLE4Q04727 773 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 PRSS36Q5K4E3 855 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 MOB3BQ86TA1 216 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 OR10AD1Q8NGE0 317 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 PDFQ9HBH1 243 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 BARX1Q9HBU1 254 aaPredicted RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 TTC3P53804 2025 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 GLAP06280 429 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 NID1P14543 1247 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 OPRM1P35372 400 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 RPS27AP62979 156 aaKnown RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 UBA52P62987 128 aaKnown RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 FOXF1Q12946 379 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 OR1J1Q8NGS3 322 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 ARPC5LQ9BPX5 153 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 ZPBPQ9BS86 351 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 LAT2Q9GZY6 243 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 SLA2Q9H6Q3 261 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 TRGV5A0A0B4J1U4 118 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 SPRY1O43609 319 aaPredicted RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 OR5G3P0C626 314 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 KCNJ8Q15842 424 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 PLAC9Q5JTB6 97 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 C20orf85Q9H1P6 137 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 SERGEFQ9UGK8 458 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 PPIHO43447 177 aaKnown RBP7.77□□□□□ -1.17
ABCA4-201ENST00000370225 MT-CO3P00414 261 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 SLC35D3Q5M8T2 416 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 PLXDC2Q6UX71 529 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 LINC01465Q8N7H1 131 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 OXGR1Q96P68 337 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 CHST2Q9Y4C5 530 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 SYT5O00445 386 aa7.77□□□□□ -1.17
ABCA4-201ENST00000370225 SDCBPO00560 298 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms