RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SLC17A1Q14916 467 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 DOK3Q7L591 496 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 GRINAQ7Z429 371 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 VN1R2Q8NFZ6 395 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 NRSN2Q9GZP1 204 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 MIXL1Q9H2W2 232 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 SLX4Q8IY92 1834 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 MDFIC2A0A1B0GVS7 189 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 NKX2-1P43699 371 aaPredicted RBP14.49□□□□□ -0.09
COL17A1-202ENST00000369733 TAF9Q16594 264 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 C2orf50Q96LR7 162 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 NKX2-4Q9H2Z4 354 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 SERTM1A2A2V5 107 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 EIF4E2O60573 245 aaKnown RBP14.49□□□□□ -0.09
COL17A1-202ENST00000369733 INHBBP09529 407 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 NFYBP25208 207 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 IL2RGP31785 369 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 PSMB3P49720 205 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 LINC00052Q96N35 136 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 PLK3Q9H4B4 646 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 ZCCHC4Q9H5U6 513 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 ACAD8Q9UKU7 415 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 MMACHCQ9Y4U1 282 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 TBPP20226 339 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 FAM209AQ5JX71 171 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 EXD3Q8N9H8 876 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 SLCO1C1Q9NYB5 712 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 KIF13BQ9NQT8 1826 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 ADAMTS7Q9UKP4 1686 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 CD37P11049 281 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 OR52W1Q6IF63 320 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 OR5M8Q8NGP6 311 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 SEH1LQ96EE3 360 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 TBC1D29Q9UFV1 150 aa14.49□□□□□ -0.09
COL17A1-202ENST00000369733 ING1Q9UK53 422 aaPredicted RBP14.49□□□□□ -0.09
COL17A1-202ENST00000369733 GLSO94925 669 aaPredicted RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 PTAFRP25105 342 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 CORO6Q6QEF8 472 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 LIMS2Q7Z4I7 341 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 SLAMF6Q96DU3 332 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 BARHL1Q9BZE3 327 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 FGF22Q9HCT0 170 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 A0A087WV62 115 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 HSD17B6O14756 317 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 CA3P07451 260 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 SFTA3P0C7M3 94 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 AKR1C3P42330 323 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TIAL1Q01085 375 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 CD300LDQ6UXZ3 194 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 OR2W3Q7Z3T1 314 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 BAGE3Q86Y29 109 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 BAGE2Q86Y30 109 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 ABHD1Q96SE0 405 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TRAPPC2LQ9UL33 140 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 CA14Q9ULX7 337 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 Q6ZNB5 142 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 FBXW5Q969U6 566 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 MAP3K3Q99759 626 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 PLEKHA2Q9HB19 425 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 DHCR7Q9UBM7 475 aaKnown RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TRAV20A0A0B4J274 112 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 CYTIPO60759 359 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TUSC2O75896 110 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 AKR7A3O95154 331 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF250P15622 560 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 KITLGP21583 273 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TMEM31Q5JXX7 168 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 OTPQ5XKR4 325 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 NHLRC1Q6VVB1 395 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 IL34Q6ZMJ4 242 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 LRRTM1Q86UE6 522 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 MUC20Q8N307 709 aaPredicted RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 UHRF2Q96PU4 802 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 FKRPQ9H9S5 495 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 GLI4P10075 376 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 SELENOPP49908 381 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF77Q15935 545 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 PRTGQ2VWP7 1150 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 EMG1Q92979 244 aaKnown RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 BORCS7Q96B45 105 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 ZC3HAV1LQ96H79 300 aaKnown RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 AKR1E2Q96JD6 320 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 SPACA5Q96QH8 159 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 SIGLEC11Q96RL6 698 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TRAF4Q9BUZ4 470 aaPredicted RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 TINAGL1Q9GZM7 467 aaPredicted RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 PTRH2Q9Y3E5 179 aaKnown RBP14.48□□□□□ -0.09
COL17A1-202ENST00000369733 R4GMQ9 66 aa14.48□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF587BE7ETH6 402 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PRAMEF4O60810 478 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 RRASP10301 218 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 NQO2P16083 231 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 RPS15P62841 145 aaKnown RBP14.47□□□□□ -0.09
COL17A1-202ENST00000369733 CATR1Q13166 79 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PCDHB10Q9UN67 800 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 C2orf72A6NCS6 295 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 E5RGE8 158 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 RNASEK-C17orf49H0YIS7 233 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 AVPR2P30518 371 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms