RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ELFN2Q5R3F8 820 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 CFAP77Q6ZQR2 320 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 MRGPRGQ86SM5 289 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 SKA3Q8IX90 412 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 FAM192AQ9GZU8 254 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 HDHD2Q9H0R4 259 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 OPN3Q9H1Y3 402 aaPredicted RBP10.79□□□□□ -0.68
TUBE1-202ENST00000368662 CENPMQ9NSP4 180 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 DDX28Q9NUL7 540 aaKnown RBP10.79□□□□□ -0.68
TUBE1-202ENST00000368662 PLEK2Q9NYT0 353 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 LRP12Q9Y561 859 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 MAGEB4O15481 346 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 SGCEO43556 437 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 LALBAP00709 142 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 CD36P16671 472 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 CD53P19397 219 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 BMP5P22003 454 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 HSD11B1P28845 292 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 HOXC12P31275 282 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ARR3P36575 388 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 LIPAP38571 399 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 RAB35Q15286 201 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 TAF13Q15543 124 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 TIMM50Q3ZCQ8 353 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ALDH16A1Q8IZ83 802 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 C17orf78Q8N4C9 275 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF433Q8N7K0 673 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 GALNT11Q8NCW6 608 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 BCL2L2Q92843 193 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ATF6BQ99941 703 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 PNRC2Q9NPJ4 139 aaKnown RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 NDUFB11Q9NX14 153 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ATPIF1Q9UII2 106 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 A0A096LPE4 126 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 A0A1W2PPZ6 126 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 A6NHS1 94 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 PLPP2O43688 288 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 APOC1P02654 83 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 CD1AP06126 327 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 MMP7P09237 267 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF32P17041 273 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 CELP19835 753 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 PSMA1P25786 263 aaKnown RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF829Q3KNS6 432 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 LIPKQ5VXJ0 399 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 TMEM53Q6P2H8 277 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 PHC2Q8IXK0 858 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 OR10S1Q8NGN2 331 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF420Q8TAQ5 688 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-202ENST00000368662 SMIM19Q96E16 107 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 YIPF6Q96EC8 236 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 HDHD5Q9BXW7 423 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 OR2H1Q9GZK4 316 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 RNF121Q9H920 327 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 SLC5A6Q9Y289 635 aa10.78□□□□□ -0.68
TUBE1-202ENST00000368662 NCOA6Q14686 2063 aaPredicted RBP10.77□□□□□ -0.68
TUBE1-202ENST00000368662 ZFYVE26Q68DK2 2539 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 CCL21O00585 134 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 DOK2O60496 412 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 NOL3O60936 208 aaKnown RBP10.77□□□□□ -0.69
TUBE1-202ENST00000368662 RAD51DO75771 328 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 LYZL6O75951 148 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 RPP14O95059 124 aaKnown RBP10.77□□□□□ -0.69
TUBE1-202ENST00000368662 GABRA5P31644 462 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.69
TUBE1-202ENST00000368662 DOC2BQ14184 412 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 CDK5R1Q15078 307 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 GABRA6Q16445 453 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 TBRG1Q3YBR2 411 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 CCDC92Q53HC0 331 aaPredicted RBP10.77□□□□□ -0.69
TUBE1-202ENST00000368662 SFRP5Q5T4F7 317 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 C1QTNF12Q5T7M4 302 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 MTFR2Q6P444 385 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 FDX2Q6P4F2 183 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 P2RY8Q86VZ1 359 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 CLVS1Q8IUQ0 354 aaPredicted RBP10.77□□□□□ -0.69
TUBE1-202ENST00000368662 SPTSSAQ969W0 71 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 COQ7Q99807 217 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 FUNDC2Q9BWH2 189 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 MOB1AQ9H8S9 216 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 OBP2BQ9NPH6 170 aa10.77□□□□□ -0.69
TUBE1-202ENST00000368662 A0A1B0GUH1 482 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 A8MXE2 369 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 E9PI62 339 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 OGG1O15527 345 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 PAX7P23759 505 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 TGFBR2P37173 567 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 MMP16P51512 607 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 CCR9P51686 369 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 TMBIM6P55061 237 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 UBE2NP61088 152 aaKnown RBP10.76□□□□□ -0.69
TUBE1-202ENST00000368662 PSG4Q00888 419 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 TRAM1Q15629 374 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 SSX1Q16384 188 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 HIKESHIQ53FT3 197 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 GPR107Q5VW38 600 aa10.76□□□□□ -0.69
TUBE1-202ENST00000368662 DMKNQ6E0U4 476 aaPredicted RBP10.76□□□□□ -0.69
TUBE1-202ENST00000368662 LUZP2Q86TE4 346 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms