RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 AMER3Q8N944 861 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 OR10X1Q8NGY0 326 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 OR52N1Q8NH53 320 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 INTS12Q96CB8 462 aaKnown RBP11.71□□□□□ -0.53
PTPRK-207ENST00000368226 TAAR9Q96RI9 348 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.53
PTPRK-207ENST00000368226 SLC23A1Q9UHI7 598 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 FABP7O15540 132 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 CLN5O75503 358 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 UBL3O95164 117 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 GLULP15104 373 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 KCNJ8Q15842 424 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 CDONQ4KMG0 1287 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 LAIR1Q6GTX8 287 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 NKAIN3Q8N8D7 197 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF71Q9NQZ8 489 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-207ENST00000368226 NDRG4Q9ULP0 352 aaKnown RBP11.71□□□□□ -0.53
PTPRK-207ENST00000368226 EXO1Q9UQ84 846 aaKnown RBP11.71□□□□□ -0.53
PTPRK-207ENST00000368226 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.54
PTPRK-207ENST00000368226 FCN2Q15485 313 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 KIRREL2Q6UWL6 708 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 ARIH2OSQ8N7S6 290 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 OR51A4Q8NGJ6 313 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 OR51A2Q8NGJ7 313 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 PLPPR2Q96GM1 343 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 PTDSS2Q9BVG9 487 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 GHRLQ9UBU3 117 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 SLCO1B1Q9Y6L6 691 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 FRG2CA6NGY1 282 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 C17orf112F2Z3M2 114 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 SSX4O60224 188 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 YIF1AO95070 293 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 ALOX5APP20292 161 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 CASP3P42574 277 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 NPBWR1P48145 328 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 PEA15Q15121 130 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 OR1L3Q8NH93 324 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 A3GALT2U3KPV4 340 aa11.71□□□□□ -0.54
PTPRK-207ENST00000368226 GABARAPH6UMI1 98 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 MBTPS2O43462 519 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 GABARAPO95166 117 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 GPANK1O95872 356 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 CRYAAP02489 173 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 MGST1P10620 155 aaKnown RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 ELK1P19419 428 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 IL3RAP26951 378 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 GSK3AP49840 483 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 TAS2R30P59541 319 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 CLN3Q13286 438 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 FCRL6Q6DN72 434 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 PAPPA2Q9BXP8 1791 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 MEIKINA0A087WXM9 373 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 TRDV1A0A1B0GX56 115 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 PRSS37A4D1T9 235 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 HEXAP06865 529 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 KIR2DL3P43628 341 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 HTR4Q13639 388 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 FZD2Q14332 565 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 OR10K2Q6IF99 312 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 LIN37Q96GY3 246 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 OXGR1Q96P68 337 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 GNRHR2Q96P88 292 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 CDX2Q99626 313 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 HES7Q9BYE0 225 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 SHARPINQ9H0F6 387 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 PLK3Q9H4B4 646 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 KLK4Q9Y5K2 254 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 SPRY1O43609 319 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 SEMG1P04279 462 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 PI3P19957 117 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 UBE2MP61081 183 aaKnown RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 OPALINQ96PE5 141 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 SHROOM3Q8TF72 1996 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 TRABD2BA6NFA1 517 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 GABRA4P48169 554 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 ZNF133P52736 654 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 RAB11AP62491 216 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 RPS27AP62979 156 aaKnown RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 UBA52P62987 128 aaKnown RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 CD300LGQ6UXG3 332 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 TRMT61AQ96FX7 289 aaKnown RBP11.7□□□□□ -0.54
PTPRK-207ENST00000368226 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 FIGNL2A6NMB9 653 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 H0Y8G0 127 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 NRASP01111 189 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 ATP1B1P05026 303 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 SPINK2P20155 84 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 ACHEP22303 614 aa11.7□□□□□ -0.54
PTPRK-207ENST00000368226 AADACP22760 399 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms