RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GPANK1O95872 356 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 QDPRP09417 244 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 MSL3P1P0C860 447 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 ZNF44P15621 663 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 ALOX5APP20292 161 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 PPT1P50897 306 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 FBXW12Q6X9E4 464 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 RELL2Q8NC24 303 aaPredicted RBP10.58□□□□□ -0.72
COPA-202ENST00000368069 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.58□□□□□ -0.72
COPA-202ENST00000368069 S100PBPQ96BU1 408 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 CMTM3Q96MX0 182 aa10.58□□□□□ -0.72
COPA-202ENST00000368069 NXT1Q9UKK6 140 aaKnown RBP10.58□□□□□ -0.72
COPA-202ENST00000368069 PIKFYVEQ9Y2I7 2098 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 OR5H14A6NHG9 310 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 TMEM127O75204 238 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 EML2O95834 649 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 TK1P04183 234 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 CELA2BP08218 269 aaPredicted RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 ZNF728P0DKX0 622 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 CDKN2AP42771 156 aaKnown RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 ZNF684Q5T5D7 378 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 DMKNQ6E0U4 476 aaPredicted RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 FAM71CQ8NEG0 241 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.57□□□□□ -0.721e-6■■■□□ 19.1
COPA-202ENST00000368069 FLRT3Q9NZU0 649 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 LSM2Q9Y333 95 aaKnown RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 CKAP5Q14008 2032 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 TRAPPC2LH3BP13 241 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 TOR1AO14656 332 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 RAC2P15153 192 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 LAP3P28838 519 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 SLC6A1P30531 599 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 RPS18P62269 152 aaKnown RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 HYAL1Q12794 435 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 CDONQ4KMG0 1287 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 PTP4A1Q93096 173 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 MARC2Q969Z3 335 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 GPR84Q9NQS5 396 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 OR5V1Q9UGF6 321 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 ZNF236Q9UL36 1845 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 LILRA5A6NI73 299 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 GLSO94925 669 aaPredicted RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 OR2F2O95006 317 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 GNB3P16520 340 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 TBXA2RP21731 343 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 ZNF117Q03924 483 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 OR2F1Q13607 317 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 WDR38Q5JTN6 314 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 NAXDQ8IW45 347 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 RNF128Q8TEB7 428 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 ZCCHC4Q9H5U6 513 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 SLC22A11Q9NSA0 550 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 QPCTLQ9NXS2 382 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 CSAG2Q9Y5P2 127 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 LOC285556D6RIA3 1793 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 SCN3AQ9NY46 2000 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 MEIKINA0A087WXM9 373 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 BPNT1O95861 308 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 SNRPNP63162 240 aaKnown RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 TAGLNQ01995 201 aaKnown RBP10.57□□□□□ -0.72
COPA-202ENST00000368069 GSG1Q2KHT4 349 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 OGFOD3Q6PK18 319 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 LRRC46Q96FV0 321 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 ZNF681Q96N22 645 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 PBOV1Q9GZY1 135 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 NELFAQ9H3P2 528 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 ANKRD10Q9NXR5 420 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 PISDQ9UG56 409 aa10.57□□□□□ -0.72
COPA-202ENST00000368069 CD300LBA8K4G0 201 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 HOXC4P09017 264 aaPredicted RBP10.56□□□□□ -0.72
COPA-202ENST00000368069 FOSL2P15408 326 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 ENPP1P22413 925 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 S100PP25815 95 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 SERPINF1P36955 418 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 P2RX3P56373 397 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 ZAR1Q86SH2 424 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 ESX1Q8N693 406 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 SUMF2Q8NBJ7 301 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 GPBAR1Q8TDU6 330 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 YIPF5Q969M3 257 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
COPA-202ENST00000368069 ZNF845Q96IR2 970 aaPredicted RBP10.56□□□□□ -0.72
COPA-202ENST00000368069 WFDC6Q9BQY6 131 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 PIGQQ9BRB3 760 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 LRFN1Q9P244 771 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 LRP12Q9Y561 859 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 SCN4AP35499 1836 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 NDUFB6O95139 128 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 HOXB9P17482 250 aaPredicted RBP10.56□□□□□ -0.72
COPA-202ENST00000368069 CHATP28329 748 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
COPA-202ENST00000368069 HRH1P35367 487 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 CARD18P57730 90 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 FZD2Q14332 565 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 THEM4Q5T1C6 240 aa10.56□□□□□ -0.72
COPA-202ENST00000368069 FAM109BQ6ICB4 259 aaPredicted RBP10.56□□□□□ -0.72
COPA-202ENST00000368069 FAM122CQ6P4D5 195 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms