RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CD8AP01732 235 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 H2BFMP0C1H6 154 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 ZNF735P0CB33 412 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 HLA-DOBP13765 273 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 CFHR1Q03591 330 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 SFRP5Q5T4F7 317 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 C1orf189Q5VU69 101 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 ZNF584Q8IVC4 421 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 SLC38A6Q8IZM9 456 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 AQP3Q92482 292 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 PRRT1Q99946 306 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 NUDT16L1Q9BRJ7 211 aaKnown RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 UQCC2Q9BRT2 126 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 CHST6Q9GZX3 395 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 MFFQ9GZY8 342 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 FBLN5Q9UBX5 448 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 GDF2Q9UK05 429 aaPredicted RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 RHBDD3Q9Y3P4 386 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 TDRD6O60522 2096 aaKnown RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 THADAQ6YHU6 1953 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 A0A0D9SG52 128 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 A0A1B0GTI1 187 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 DCDC2BA2VCK2 349 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 BET1O15155 118 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 BPNT1O95861 308 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 UBBP0CG47 229 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 BDKRB2P30411 391 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 GSK3AP49840 483 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 UBA52P62987 128 aaKnown RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 HSF1Q00613 529 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 TAGLNQ01995 201 aaKnown RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 OC90Q02509 493 aaPredicted RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 SPOCK1Q08629 439 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 ATPAF1Q5TC12 328 aaPredicted RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 LRFN4Q6PJG9 635 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 LANCL3Q6ZV70 420 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 HSD17B13Q7Z5P4 300 aaPredicted RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 PDZD9Q8IXQ8 264 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 BPIFB2Q8N4F0 458 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 SPERTQ8NA61 448 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 OR51A2Q8NGJ7 313 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 OR5M9Q8NGP3 310 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 NUBPLQ8TB37 319 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 RNF138Q8WVD3 245 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 FAM46BQ96A09 425 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.36
CD48-201ENST00000368045 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.36
CD48-201ENST00000368045 A0A1W2PNV4 684 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 A8MXK9 166 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 M0QYG6 137 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 SDC3O75056 442 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 SLC25A4P12235 298 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 GLB1P16278 677 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 MPGP29372 298 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 NUP62P37198 522 aaPredicted RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 UBE2MP61081 183 aaKnown RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 SORDQ00796 357 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 TLE3Q04726 772 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 OR7A5Q15622 319 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 LY6G6FQ5SQ64 297 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 LIN54Q6MZP7 749 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 PAPD4Q6PIY7 484 aaKnown RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 ALKAL2Q6UX46 152 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 GLRX5Q86SX6 157 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ZDHHC22Q8N966 263 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 OR10H5Q8NGA6 315 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 OR5M8Q8NGP6 311 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 FGF21Q9NSA1 209 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 FAM206AQ9NX38 181 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ALKBH4Q9NXW9 302 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 CYB5R1Q9UHQ9 305 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 KLK13Q9UKR3 277 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 B3GALT5Q9Y2C3 310 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 CPAMD8Q8IZJ3 1885 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 CDH23Q9H251 3354 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 IGLV3-12A0A075B6K2 115 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 SCO1O75880 301 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 ERCC1P07992 297 aaPredicted RBP12.76□□□□□ -0.37
CD48-201ENST00000368045 MGMTP16455 207 aa12.76□□□□□ -0.37
CD48-201ENST00000368045 HLA-GP17693 338 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms