RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 HCCSP53701 268 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 H2BFSP57053 126 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 IGLV3-21P80748 117 aaPredicted RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 KLRB1Q12918 225 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 ESPL1Q14674 2120 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 ZNF169Q14929 603 aaPredicted RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.35□□□□□ -0.75
USF1-201ENST00000368019 OR7E24Q6IFN5 339 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 ALKAL2Q6UX46 152 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 C6orf15Q6UXA7 325 aaPredicted RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 JAZF1Q86VZ6 243 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 OR4N5Q8IXE1 308 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 CLEC1AQ8NC01 280 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 ZCCHC10Q8TBK6 192 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 TNFAIP8L1Q8WVP5 186 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 PCNPQ8WW12 178 aaKnown RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 ST8SIA2Q92186 375 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 RERGQ96A58 199 aaPredicted RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 PTX4Q96A99 478 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 ANKRD9Q96BM1 317 aaPredicted RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 MRPS24Q96EL2 167 aaKnown RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 ADAD1Q96M93 576 aaKnown RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 OR6C1Q96RD1 312 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 NMNAT3Q96T66 252 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 ULBP3Q9BZM4 244 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 RAB33BQ9H082 229 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 WDR76Q9H967 626 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 PCDHB16Q9NRJ7 776 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 FRRS1LQ9P0K9 344 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 SEMA5BQ9P283 1151 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 EPHA6Q9UF33 1036 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 MRM2Q9UI43 246 aaKnown RBP10.35□□□□□ -0.75
USF1-201ENST00000368019 TP53TG5Q9Y2B4 290 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 HIVEP3Q5T1R4 2406 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 UNC79Q9P2D8 2635 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 LOC100289279A0A1B0GTE1 492 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 SERINC4A6NH21 518 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
USF1-201ENST00000368019 GOSR2O14653 212 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 FOXS1O43638 330 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 EIF4E2O60573 245 aaKnown RBP10.34□□□□□ -0.75
USF1-201ENST00000368019 CTSVO60911 334 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 WNT11O96014 354 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 CT62P0C5K7 136 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 S1PR1P21453 382 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 GALNSP34059 522 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 RORAP35398 523 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 SKP1P63208 163 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 CTAG1AP78358 180 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 DBPQ10586 325 aaPredicted RBP10.34□□□□□ -0.75
USF1-201ENST00000368019 ETFDHQ16134 617 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 SFRP5Q5T4F7 317 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 LIPNQ5VXI9 398 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 WBP2NLQ6ICG8 309 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 MTFR2Q6P444 385 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 LEG1Q6P5S2 330 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 NHLRC1Q6VVB1 395 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 CFAP77Q6ZQR2 320 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 MUC20Q8N307 709 aaPredicted RBP10.34□□□□□ -0.75
USF1-201ENST00000368019 C12orf45Q8N5I9 185 aaPredicted RBP10.34□□□□□ -0.75
USF1-201ENST00000368019 OR52R1Q8NGF1 315 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 OR5M1Q8NGP8 315 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 OR6K6Q8NGW6 343 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 OR2G2Q8NGZ5 317 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 ASB17Q8WXJ9 295 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 RIT1Q92963 219 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 VSTM2LQ96N03 204 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 PTCHD1Q96NR3 888 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 TGM7Q96PF1 710 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 PSMG3-AS1Q96PY0 264 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 OR1F2PQ96R84 312 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 ZNF416Q9BWM5 594 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 FXYD6Q9H0Q3 95 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 PIGMQ9H3S5 423 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 Q9N2J8 555 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 SLC2A8Q9NY64 477 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 COQ3Q9NZJ6 369 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 NDRG3Q9UGV2 375 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 GPN3Q9UHW5 284 aaPredicted RBP10.34□□□□□ -0.75
USF1-201ENST00000368019 PLCL2Q9UPR0 1127 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 ERVK-19Q9WJR5 959 aa10.34□□□□□ -0.75
USF1-201ENST00000368019 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 ITPR2Q14571 2701 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 MEGF11A6BM72 1044 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 A8MUA0 341 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 H0YGG7 62 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 MAGEB4O15481 346 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 BCL2L11O43521 198 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 DOK2O60496 412 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 RDH16O75452 317 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 RENP00797 406 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 CD74P04233 296 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 POU3F2P20265 443 aaPredicted RBP10.33□□□□□ -0.76
USF1-201ENST00000368019 ALOX5APP20292 161 aa10.33□□□□□ -0.76
USF1-201ENST00000368019 CAPZBP47756 277 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms