RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ASH2LQ9UBL3 628 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TAGLN3Q9UI15 199 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ATPIF1Q9UII2 106 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 AURKCQ9UQB9 309 aa11.59□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CLDN25C9JDP6 229 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GMNNO75496 209 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GADD45GO95257 159 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ABHD16AO95870 558 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IGHV2-5P01817 119 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FPR3P25089 353 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 HTR5AP47898 357 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GSSP48637 474 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RPS6KA3P51812 740 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SMIM11AP58511 58 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 KRT72Q14CN4 511 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 MTX3Q5HYI7 312 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ACSM5Q6NUN0 579 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 C1orf94Q6P1W5 598 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 NPEPL1Q8NDH3 523 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR51F2Q8NH61 342 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR1F12Q8NHA8 337 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 HAVCR1Q96D42 359 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 LRRC37BQ96QE4 947 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR52D1Q9H346 318 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 KRCC1Q9NPI7 259 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PLEK2Q9NYT0 353 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PURGQ9UJV8 347 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 B9D1Q9UPM9 204 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ARL2BPQ9Y2Y0 163 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 LHFPL6Q9Y693 200 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 V9GYQ6 96 aa11.58□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TRAV20A0A0B4J274 112 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 J3QW42 95 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RER1O15258 196 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TPD52L2O43399 206 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PPP1R3DO95685 299 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GPANK1O95872 356 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 AVPP01185 164 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DBHP09172 617 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ANPEPP15144 967 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 KRTAP27-1Q3LI81 207 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZMAT1Q5H9K5 638 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RINLQ6ZS11 566 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ZBTB46Q86UZ6 589 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR6V1Q8N148 313 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CCL17Q92583 94 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RAB1CQ92928 201 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PTP4A1Q93096 173 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CMBLQ96DG6 245 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 NSMCE2Q96MF7 247 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ERMAPQ96PL5 475 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DCLRE1CQ96SD1 692 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DDOQ99489 341 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 EGLN1Q9GZT9 426 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 LPAR2Q9HBW0 351 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GRIP1Q9Y3R0 1128 aa11.57□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TENM1Q9UKZ4 2725 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PLPP2O43688 288 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FABP3P05413 133 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 HIST1H1CP16403 213 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GSTM3P21266 225 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 CRABP1P29762 137 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RRM2P31350 389 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 ERFP50548 548 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GNGT1P63211 74 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SPIBQ01892 262 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DBPQ10586 325 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 COX10Q12887 443 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TSPAN31Q12999 210 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 HNRNPA0Q13151 305 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PGBD2Q6P3X8 592 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PGM2L1Q6PCE3 622 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FBXW12Q6X9E4 464 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 COLCA1Q6ZS62 124 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DEFB107AQ8IZN7 70 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 GJC3Q8NFK1 279 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SLC26A10Q8NG04 563 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SAMD8Q96LT4 415 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 COG8Q96MW5 612 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 NMNAT3Q96T66 252 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 COQ7Q99807 217 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RERGLQ9H628 205 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DCAF16Q9NXF7 216 aa11.56□□□□□ -0.56
TNFRSF1A-202ENST00000366159 A0A1B0GWJ7 208 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TCF21O43680 179 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IDH3BO43837 385 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 TIMM8AO60220 97 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 OR10H3O60404 316 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 DCTN3O75935 186 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 PNPP00491 289 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 IGHV2-70P01814 119 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RAC2P15153 192 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SLC6A6P31641 620 aa11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 SRP14P37108 136 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 RBMXP38159 391 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-202ENST00000366159 MAGEA2P43356 314 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms