RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TSPAN11A1L157 253 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 GGT1P19440 569 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 SRMP19623 302 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 MSR1P21757 451 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 TUBG1P23258 451 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 CD82P27701 267 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 PEX19P40855 299 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 UBE2MP61081 183 aaKnown RBP2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 RPS15AP62244 130 aaKnown RBP2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 PRR3P79522 188 aaKnown RBP2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 PON2Q15165 354 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 CHRFAM7AQ494W8 412 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 CAVIN4Q5BKX8 364 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 TPTE2P1Q5T6R2 138 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 GPR107Q5VW38 600 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 H3F3CQ6NXT2 135 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 ARL9Q6T311 187 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 MBOAT2Q6ZWT7 520 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 FAM122BQ7Z309 247 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 KRTAP11-1Q8IUC1 163 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 C12orf56Q8IXR9 622 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 C15orf56Q8N910 161 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 LRRC75AQ8NAA5 344 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 OR52E2Q8NGJ4 325 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 ZNF596Q8TC21 504 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 ZNF707Q96C28 371 aaPredicted RBP2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 ZNF681Q96N22 645 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 PIGUQ9H490 435 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 RGCCQ9H4X1 137 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 TDRD3Q9H7E2 651 aaKnown RBP2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 FANCEQ9HB96 536 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 NOX3Q9HBY0 568 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 MRM3Q9HC36 420 aaKnown RBP2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 SLC40A1Q9NP59 571 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 TUBG2Q9NRH3 451 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 UVRAGQ9P2Y5 699 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 RHBDD3Q9Y3P4 386 aa2.41□□□□□ -2.02
RNU6-28P-201ENST00000362378 MTCL1Q9Y4B5 1905 aaKnown RBP2.4□□□□□ -2.02
RNU6-28P-201ENST00000362378 IGKV6D-41A0A0C4DH26 115 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 IGHV5-51A0A0C4DH38 117 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF99A8MXY4 864 aaPredicted RBP2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 C11orf94C9JXX5 98 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 INS-IGF2F8WCM5 200 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 OXTP01178 125 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 TACSTD2P09758 323 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 PRPS2P11908 318 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 PRKACAP17612 351 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 RAB4AP20338 218 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 U2AF2P26368 475 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CEACAM3P40198 252 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CSNK1A1P48729 337 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 VSX2P58304 361 aaPredicted RBP2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 MECOMQ03112 1051 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 DNAJC3Q13217 504 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CAPRIN1Q14444 709 aaKnown RBP2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 GINS1Q14691 196 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 RPEL1Q2QD12 228 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 TRMT5Q32P41 509 aaKnown RBP2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 TSPO2Q5TGU0 170 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 DNAJC24Q6P3W2 148 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 FAM92BQ6ZTR7 304 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF786Q8N393 782 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF321PQ8N8H1 164 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CHST4Q8NCG5 386 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR10AD1Q8NGE0 317 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR52K1Q8NGK4 314 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 APH1BQ8WW43 257 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 NAT6Q93015 286 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CEP170P1Q96L14 293 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CSPG4P5Q96PW8 444 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 FOXC2Q99958 501 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 IL22Q9GZX6 179 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 TPK1Q9H3S4 243 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CYP3A43Q9HB55 503 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 LHX9Q9NQ69 397 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 CHRAC1Q9NRG0 131 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 FAM49BQ9NUQ9 324 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 GAKO14976 1311 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 SYNRGQ9UMZ2 1314 aa2.4□□□□□ -2.03
RNU6-28P-201ENST00000362378 A0A1B0GVX0 72 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 GABRR3A8MPY1 467 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 SIVA1O15304 175 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 ERI3O43414 337 aaKnown RBP2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 ANGPTL7O43827 346 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 RP2O75695 350 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 GABARAPO95166 117 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 HPRT1P00492 218 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 HLA-DPB1P04440 258 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 TLX1NBP0CAT3 122 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 ERGP11308 486 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 CSNK2A2P19784 350 aaPredicted RBP2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 RAB3AP20336 220 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 RFC3P40938 356 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 MNAT1P51948 309 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF121P58317 390 aaPredicted RBP2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 ERCC8Q13216 396 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 MADCAM1Q13477 382 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 NKAIN1Q4KMZ8 207 aa2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 ABHD12BQ7Z5M8 362 aaPredicted RBP2.39□□□□□ -2.03
RNU6-28P-201ENST00000362378 LINC00523Q86TU6 105 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms