RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RTL8AQ9BWD3 113 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 ACOT8O14734 319 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 SMIM18P0DKX4 95 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 SLC19A1P41440 591 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 LIM2P55344 173 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 RPL27P61353 136 aaKnown RBP14.66□□□□□ -0.06
COL18A1-203ENST00000359759 CDK5Q00535 292 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 IHHQ14623 411 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 FAM78AQ5JUQ0 283 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 FBXO46Q6PJ61 603 aaPredicted RBP14.66□□□□□ -0.06
COL18A1-203ENST00000359759 C5orf46Q6UWT4 87 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 DEFB108BQ8NET1 73 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 SEH1LQ96EE3 360 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF749O43361 778 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 AQP8O94778 261 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 GLAP06280 429 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 TRAPPC2P0DI81 140 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 TRAPPC2BP0DI82 140 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 PFN3P60673 137 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 SYT14P1Q58G82 188 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 YRDCQ86U90 279 aaKnown RBP14.66□□□□□ -0.06
COL18A1-203ENST00000359759 CMBLQ96DG6 245 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 CABLES2Q9BTV7 478 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 CPEP16870 476 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 ADRA2CP18825 462 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SLC48A1Q6P1K1 146 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 CDC20BQ86Y33 519 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 ISL2Q96A47 359 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SLC46A1Q96NT5 459 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 TEAD3Q99594 435 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SEMA6CQ9H3T2 930 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 PARD6AQ9NPB6 346 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 GDE1Q9NZC3 331 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 IGHV3-15A0A0B4J1V0 119 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 GP2P55259 537 aaKnown RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 KCNAB1Q14722 419 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 H1FNTQ75WM6 255 aaPredicted RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 KLHDC8BQ8IXV7 354 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 OR5AP2Q8NGF4 316 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 PDLIM7Q9NR12 457 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 KNDC1Q76NI1 1749 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 LRP3O75074 770 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 WDR1O75083 606 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 TOX4O94842 621 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 HIST1H1CP16403 213 aaKnown RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 RPL12P30050 165 aaKnown RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 ANKRD16Q6P6B7 361 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 DOK3Q7L591 496 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SLC39A7Q92504 469 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 DHRS9Q9BPW9 319 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 PSENENQ9NZ42 101 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 KIAA1456Q9P272 454 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SLC5A6Q9Y289 635 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SLC17A4Q9Y2C5 497 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 COL2A1P02458 1487 aaPredicted RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 A0A1W2PPQ1 181 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 EIF1BO60739 113 aaKnown RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 OR2F2O95006 317 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 RAF1P04049 648 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SNRPGP62308 76 aaKnown RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 OR2F1Q13607 317 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 ACOT6Q3I5F7 207 aaPredicted RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 TRNP1Q6NT89 227 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 ACOT7LQ6ZUV0 252 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 CNMDO75829 334 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 PMCHP20382 165 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 HRH1P35367 487 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 HNRNPA3P51991 378 aaKnown RBP14.65□□□□□ -0.06
COL18A1-203ENST00000359759 DOC2BQ14184 412 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 SLC39A11Q8N1S5 342 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 BOD1Q96IK1 185 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 A3GALT2U3KPV4 340 aa14.65□□□□□ -0.06
COL18A1-203ENST00000359759 PHOX2AO14813 284 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 YKT6O15498 198 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 JTBO76095 146 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 SLC25A4P12235 298 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 AGBL5Q8NDL9 886 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 SMIM7Q9BQ49 75 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM43Q9BTV4 400 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 LOC102723971A0A1B0GUV8 181 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 MBP02144 154 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 FGF7P21781 194 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 RPS16P62249 146 aaKnown RBP14.64□□□□□ -0.07
COL18A1-203ENST00000359759 ADGRG3Q86Y34 549 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 CISD2Q8N5K1 135 aaKnown RBP14.64□□□□□ -0.07
COL18A1-203ENST00000359759 DEFB127Q9H1M4 99 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 GAREM1Q9H706 876 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 RICTORQ6R327 1708 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 COL14A1Q05707 1796 aaKnown RBP14.64□□□□□ -0.07
COL18A1-203ENST00000359759 A0A096LPE4 126 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 A0A1W2PPZ6 126 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 J3QR89 54 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 QDPRP09417 244 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 NQO2P16083 231 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 DUSP5Q16690 384 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 LIPNQ5VXI9 398 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 RDH5Q92781 318 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 FABP1P07148 127 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 RRASP10301 218 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms