RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ESRP2Q9H6T0 727 aaKnown RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 IGHV1-18A0A0C4DH31 117 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 IRGMA1A4Y4 181 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ZNF878C9JN71 531 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 SLC1A7O00341 560 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 FADS2O95864 444 aaKnown RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 STOMP27105 288 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 CXCR4P61073 352 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ACTC1P68032 377 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ACTA1P68133 377 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 HIST1H3AP68431 136 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 TAF13Q15543 124 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 TBC1D28Q2M2D7 210 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 CCDC92Q53HC0 331 aaPredicted RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 BEX5Q5H9J7 111 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 HIST2H3PS2Q5TEC6 136 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 SP5Q6BEB4 398 aaPredicted RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 LAIR2Q6ISS4 152 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 HIST2H3AQ71DI3 136 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 SPATC1Q76KD6 591 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ACBD4Q8NC06 268 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 CPEB3Q8NE35 698 aaKnown RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 SLC30A7Q8NEW0 376 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 SLAMF6Q96DU3 332 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 PLPPR2Q96GM1 343 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ZNF75AQ96N20 296 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ATF6BQ99941 703 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 TTTY10Q9BZA0 68 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 CENPMQ9NSP4 180 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 PLEKHB1Q9UF11 243 aaPredicted RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 KLHDC2Q9Y2U9 406 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 PCDHGB1Q9Y5G3 927 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.24□□□□□ -0.29
TPM1-206ENST00000358278 ZNF670-ZNF695F2Z2N8 137 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 PHYHO14832 338 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 SYNGR3O43761 229 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 OR2T7P0C7T2 308 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 ALOX5APP20292 161 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 CCNOP22674 350 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 PTAFRP25105 342 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 CD40P25942 277 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 GDI2P50395 445 aaKnown RBP13.24□□□□□ -0.29
TPM1-206ENST00000358278 CSNK2BP67870 215 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 BSPH1Q075Z2 132 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 ZNF786Q8N393 782 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 OR2T27Q8NH04 317 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 OR1F12Q8NHA8 337 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 AMELYQ99218 206 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 RHNO1Q9BSD3 238 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 COPS4Q9BT78 406 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 KCNN3Q9UGI6 736 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 ATPIF1Q9UII2 106 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 COPS3Q9UNS2 423 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 EXOGQ9Y2C4 368 aaKnown RBP13.24□□□□□ -0.29
TPM1-206ENST00000358278 PCDHGB5Q9Y5G0 923 aa13.24□□□□□ -0.29
TPM1-206ENST00000358278 C5orf49A4QMS7 147 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 OR6C6A6NF89 314 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 EFCAB10A6NFE3 127 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 CRYAAP02489 173 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 COX5BP10606 129 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 CCL2P13500 99 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 NR1H2P55055 460 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 ECH1Q13011 328 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 KCTD18Q6PI47 426 aaPredicted RBP13.23□□□□□ -0.29
TPM1-206ENST00000358278 AHSA2Q719I0 299 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 RFLNBQ8N5W9 214 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 OR52I1Q8NGK6 324 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 OR10S1Q8NGN2 331 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 OR1J2Q8NGS2 313 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 ASB17Q8WXJ9 295 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 COQ7Q99807 217 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 CDH20Q9HBT6 801 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 PNRC2Q9NPJ4 139 aaKnown RBP13.23□□□□□ -0.29
TPM1-206ENST00000358278 PLCXD1Q9NUJ7 323 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
TPM1-206ENST00000358278 IKZF2Q9UKS7 526 aa13.23□□□□□ -0.29
TPM1-206ENST00000358278 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 DAPL1A0PJW8 107 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 ABCD4O14678 606 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 H2BFMP0C1H6 154 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 SLC15A1P46059 708 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 GALK2Q01415 458 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 NAAAQ02083 359 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 NCMAPQ5T1S8 102 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 ZNF322Q6U7Q0 402 aaPredicted RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 KRT77Q7Z794 578 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 ACBD7Q8N6N7 88 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 IL17RDQ8NFM7 739 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 SLC7A6Q92536 515 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 GGHQ92820 318 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 DDX28Q9NUL7 540 aaKnown RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 UBAP1Q9NZ09 502 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 CNOT2Q9NZN8 540 aaKnown RBP13.22□□□□□ -0.29
TPM1-206ENST00000358278 PSORS1C1Q9UIG5 152 aa13.22□□□□□ -0.29
TPM1-206ENST00000358278 BLOC1S6Q9UL45 172 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms