RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.89■□□□□ 0.13
RTN4-204ENST00000357732 SLC6A7Q99884 636 aa15.89■□□□□ 0.13
RTN4-204ENST00000357732 NKX6-2Q9C056 277 aaPredicted RBP15.89■□□□□ 0.13
RTN4-204ENST00000357732 LANCL2Q9NS86 450 aa15.89■□□□□ 0.13
RTN4-204ENST00000357732 A6NIZ1 184 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 H3BSH0 61 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 OR2T1O43869 369 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 ALOX12BO75342 701 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 CTLA4P16410 223 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 RAP1BP61224 184 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 RAP1AP62834 184 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 FZD2Q14332 565 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 PARGQ86W56 976 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 TMEM151BQ8IW70 566 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 DTWD2Q8NBA8 298 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 STOML3Q8TAV4 291 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 THAP6Q8TBB0 222 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 PPP1R1CQ8WVI7 109 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 MARC2Q969Z3 335 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 C8orf33Q9H7E9 229 aaPredicted RBP15.88■□□□□ 0.13
RTN4-204ENST00000357732 ZNF230Q9UIE0 474 aaPredicted RBP15.88■□□□□ 0.13
RTN4-204ENST00000357732 KCNK7Q9Y2U2 307 aa15.88■□□□□ 0.13
RTN4-204ENST00000357732 COL5A1P20908 1838 aaPredicted RBP15.88■□□□□ 0.13
RTN4-204ENST00000357732 ICAM2P13598 275 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 FASLGP48023 281 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 FNTBP49356 437 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PRKXP51817 358 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PPIAP62937 165 aaKnown RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 ZNF260Q3ZCT1 412 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 SCGB2B2Q4G0G5 96 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PDSS1Q5T2R2 415 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 INO80EQ8NBZ0 244 aaPredicted RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 CDC6Q99741 560 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 MAP3K3Q99759 626 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 ZNF471Q9BX82 626 aaPredicted RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 NKX2-4Q9H2Z4 354 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PURGQ9UJV8 347 aaKnown RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 GDF2Q9UK05 429 aaPredicted RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 VSIG4Q9Y279 399 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 LOC107986453A0A1B0GWG9 222 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 NPIPB13A6NJU9 1138 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 NPIPB4C9JG80 1138 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 IGHV4-34P06331 123 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 H2AFB1P0C5Y9 115 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 HSD11B1P28845 292 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 DLX2Q07687 328 aaPredicted RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 TAF13Q15543 124 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PRAMEF17Q5VTA0 474 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 OR2W3Q7Z3T1 314 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 JAGN1Q8N5M9 183 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 FAM174AQ8TBP5 190 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 FAM46BQ96A09 425 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 UQCC2Q9BRT2 126 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 WDR13Q9H1Z4 485 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 G6PC2Q9NQR9 355 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PNO1Q9NRX1 252 aaKnown RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 FBLN5Q9UBX5 448 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 CGGBP1Q9UFW8 167 aaPredicted RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 OR52A1Q9UKL2 312 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 FARSAQ9Y285 508 aaKnown RBP15.87■□□□□ 0.13
RTN4-204ENST00000357732 RHBDD3Q9Y3P4 386 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 PIAS3Q9Y6X2 628 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 CPAMD8Q8IZJ3 1885 aa15.87■□□□□ 0.13
RTN4-204ENST00000357732 IGKV3D-11A0A0A0MRZ8 115 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 TMED7-TICAM2A0A0A6YYA0 188 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 C9orf170A2RU37 121 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 LILRA5A6NI73 299 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 PLPP3O14495 311 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 TSPAN2O60636 221 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 GABRG2P18507 467 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 CASRP41180 1078 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 TAS2R31P59538 309 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 CXADRP78310 365 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 SHHQ15465 462 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 ELAVL1Q15717 326 aaKnown RBP15.86■□□□□ 0.13
RTN4-204ENST00000357732 C1orf140Q5VVS0 124 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 ATRAIDQ6UW56 229 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 GRINAQ7Z429 371 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 METTL27Q8N6F8 245 aaPredicted RBP15.86■□□□□ 0.13
RTN4-204ENST00000357732 BPIFCQ8NFQ6 507 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 ZNF721Q8TF20 911 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 NPAS1Q99742 590 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.86■□□□□ 0.13
RTN4-204ENST00000357732 PRELID3BQ9Y3B1 194 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 TMED7Q9Y3B3 224 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 TMEM184BQ9Y519 407 aaPredicted RBP15.86■□□□□ 0.13
RTN4-204ENST00000357732 DCDC2BA2VCK2 349 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 BPNT1O95861 308 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 THEGLP0DJG4 465 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 ZNF28P17035 718 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 PNLIPRP2P54317 469 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 SLC26A5P58743 744 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 DEFA5Q01523 94 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 NAAAQ02083 359 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 INPP5JQ15735 1006 aaPredicted RBP15.86■□□□□ 0.13
RTN4-204ENST00000357732 PNLIPRP3Q17RR3 467 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 SLC25A36Q96CQ1 311 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 MVB12AQ96EY5 273 aa15.86■□□□□ 0.13
RTN4-204ENST00000357732 TBL1XR1Q9BZK7 514 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms