RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RAB36O95755 333 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 IGKV3-15P01624 115 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 CCL2P13500 99 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 CBR1P16152 277 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ZNF14P17017 642 aaPredicted RBP22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ETV1P50549 477 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 CDH15P55291 814 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 LRRN1Q6UXK5 716 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ACBD7Q8N6N7 88 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ZNF454Q8N9F8 522 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 TMEM80Q96HE8 168 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 CENPMQ9NSP4 180 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 SLCO1C1Q9NYB5 712 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 DIMT1Q9UNQ2 313 aaKnown RBP22.06■■□□□ 1.12
SSBP3-202ENST00000357475 TPRKBQ9Y3C4 175 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 IGHV1-18A0A0C4DH31 117 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 TUBAL3A6NHL2 446 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ZNF670-ZNF695F2Z2N8 137 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 CDK1P06493 297 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 DBHP09172 617 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 LIMS3P0CW19 117 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 LIMS4P0CW20 117 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 PPP3CBP16298 524 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 IGFBP2P18065 325 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 RAB35Q15286 201 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 RSPO1Q2MKA7 263 aaPredicted RBP22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ELFN2Q5R3F8 820 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ZNF322Q6U7Q0 402 aaPredicted RBP22.06■■□□□ 1.12
SSBP3-202ENST00000357475 DPPA2Q7Z7J5 298 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 STX19Q8N4C7 294 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 RNF133Q8WVZ7 376 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 SIGLEC11Q96RL6 698 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 ERVK13-1Q9NX77 482 aa22.06■■□□□ 1.12
SSBP3-202ENST00000357475 CRNNQ9UBG3 495 aaPredicted RBP22.06■■□□□ 1.12
SSBP3-202ENST00000357475 LOC100509620A0A075B734 347 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 DAPL1A0PJW8 107 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 OR6C6A6NF89 314 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 IGLV1-44P01699 117 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 OR1F12Q8NHA8 337 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 USB1Q9BQ65 265 aaKnown RBP22.05■■□□□ 1.12
SSBP3-202ENST00000357475 WACQ9BTA9 647 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 CRIM1Q9NZV1 1036 aa22.05■■□□□ 1.12
SSBP3-202ENST00000357475 ANKHD1Q8IWZ3 2542 aaKnown RBP22.05■■□□□ 1.12
SSBP3-202ENST00000357475 PRSS44E7EML9 344 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 M0R1B8 84 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 CECR9P0C854 216 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 OPRL1P41146 370 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 HTR5AP47898 357 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 CHN2P52757 468 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 ACTC1P68032 377 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 ACTA1P68133 377 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 DOC2BQ14184 412 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 ZNF684Q5T5D7 378 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 PLEKHG7Q6ZR37 379 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 PAQR4Q8N4S7 273 aaPredicted RBP22.04■■□□□ 1.12
SSBP3-202ENST00000357475 MNTQ99583 582 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 JAM3Q9BX67 310 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 NDRG3Q9UGV2 375 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 MRM2Q9UI43 246 aaKnown RBP22.04■■□□□ 1.12
SSBP3-202ENST00000357475 FBXL3Q9UKT7 428 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 PCDHGB1Q9Y5G3 927 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 TMEM14AQ9Y6G1 99 aa22.04■■□□□ 1.12
SSBP3-202ENST00000357475 IRGMA1A4Y4 181 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 MT-ND2P03891 347 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 SERPINA5P05154 406 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 ANOS1P23352 680 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 EEF1B2P24534 225 aaKnown RBP22.03■■□□□ 1.12
SSBP3-202ENST00000357475 DCKP27707 260 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 HGFACQ04756 655 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 TP53I3Q53FA7 332 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 IPCEF1Q8WWN9 437 aaPredicted RBP22.03■■□□□ 1.12
SSBP3-202ENST00000357475 OR8B4Q96RC9 309 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 ATF6BQ99941 703 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 ALG8Q9BVK2 526 aa22.03■■□□□ 1.12
SSBP3-202ENST00000357475 ISG20L2Q9H9L3 353 aaKnown RBP22.03■■□□□ 1.12
SSBP3-202ENST00000357475 DDX28Q9NUL7 540 aaKnown RBP22.03■■□□□ 1.12
SSBP3-202ENST00000357475 KLF2Q9Y5W3 355 aaPredicted RBP22.03■■□□□ 1.12
SSBP3-202ENST00000357475 ZNF878C9JN71 531 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 STOMP27105 288 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 GALEQ14376 348 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 OR2G6Q5TZ20 316 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 DMRTC2Q8IXT2 367 aaPredicted RBP22.02■■□□□ 1.12
SSBP3-202ENST00000357475 MYDGFQ969H8 173 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 HDHD2Q9H0R4 259 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 HEATR1Q9H583 2144 aaKnown RBP22.02■■□□□ 1.12
SSBP3-202ENST00000357475 IKZF2Q9UKS7 526 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 LRP12Q9Y561 859 aa22.02■■□□□ 1.12
SSBP3-202ENST00000357475 SIAH2O43255 324 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 CRYGSP22914 178 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 OR12D2P58182 307 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 GALK2Q01415 458 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ROM1Q03395 351 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 PLP2Q04941 152 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 SPOCK1Q08629 439 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 KRT77Q7Z794 578 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 NAA40Q86UY6 237 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ALDH16A1Q8IZ83 802 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 FAM169BQ8N8A8 192 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 SLC30A7Q8NEW0 376 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ASB17Q8WXJ9 295 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms