RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CASTOR1Q8WTX7 329 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 CCDC74AQ96AQ1 378 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ASB16Q96NS5 453 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 WDR13Q9H1Z4 485 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 APMAPQ9HDC9 416 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 STEAP1Q9UHE8 339 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ICAM5Q9UMF0 924 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 SLC22A13Q9Y226 551 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 MPDZO75970 2070 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ARHGEF17Q96PE2 2063 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 REV3LO60673 3130 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 FITM1A5D6W6 292 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZNF749O43361 778 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 FADS1O60427 444 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 CTAG2O75638 210 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 RAB3DO95716 219 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 AK1P00568 194 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 C5AR1P21730 350 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 PBX2P40425 430 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 MAP3K8P41279 467 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ADPRHP54922 357 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR2B8PP59922 312 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 RUNX3Q13761 415 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 SSPNQ14714 243 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 C2orf76Q3KRA6 126 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 PLEKHN1Q494U1 663 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 PAPD4Q6PIY7 484 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 JAGN1Q8N5M9 183 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 STEAP2Q8NFT2 490 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR2G2Q8NGZ5 317 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZNF563Q8TA94 476 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 GPR148Q8TDV2 347 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 SLC25A36Q96CQ1 311 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 Q9N2J8 555 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 GAR1Q9NY12 217 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 CGGBP1Q9UFW8 167 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 KCNG2Q9UJ96 466 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 KCNIP3Q9Y2W7 256 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 A0A087WV62 115 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 NUDT19A8MXV4 375 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 CYR61O00622 381 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 APBB3O95704 486 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR4E1P0C645 316 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 LINC00271P0C7V0 271 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 MYOGP15173 224 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 EN2P19622 333 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 RBM34P42696 430 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 LSSP48449 732 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 F2RL1P55085 397 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 SKP1P63208 163 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 FOXO1Q12778 655 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 GGTLC2Q14390 218 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR8G1Q15617 311 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 LINC01590Q5TEZ4 76 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 ADAM5Q6NVV9 412 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 CBLN3Q6UW01 205 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 UNQ6494/PRO21346Q6UXR6 183 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 KCTD9Q7L273 389 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 SLC36A1Q7Z2H8 476 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 KCNRGQ8N5I3 272 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR4S1Q8NGB4 309 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR1J2Q8NGS2 313 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 PHYHIPQ92561 330 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 FAM3DQ96BQ1 224 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 AMELYQ99218 206 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 KXD1Q9BQD3 176 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 SUCNR1Q9BXA5 334 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 PRO1933Q9H354 126 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 PILRAQ9UKJ1 303 aa7.44□□□□□ -1.22
CDC42SE1-201ENST00000357235 A0A087WUJ7 227 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR5H14A6NHG9 310 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 F5H0A9 414 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 BCL2L11O43521 198 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 UPK3AO75631 287 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 YIF1AO95070 293 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 NKX2-2O95096 273 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR6A2O95222 327 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 HLA-AP01891 365 aaKnown RBP7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 SPARCP09486 303 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 HNRNPA1P09651 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 AVPR2P30518 371 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 GLP1RP43220 463 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 PRPS1P60891 318 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 BTG2P78543 158 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 ALG11Q2TAA5 492 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 GFOD2Q3B7J2 385 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 JMJD6Q6NYC1 403 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 SLC16A9Q7RTY1 509 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 LRRTM1Q86UE6 522 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 GALNT16Q8N428 558 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 UBAC2Q8NBM4 344 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR6N1Q8NGY5 312 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR6X1Q8NH79 312 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 ZNF417Q8TAU3 575 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 NT5CQ8TCD5 201 aa7.43□□□□□ -1.22
CDC42SE1-201ENST00000357235 C15orf40Q8WUR7 153 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms