RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GABRG1Q8N1C3 465 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 ZNF511Q8NB15 262 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 TMEM104Q8NE00 496 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 OR2AK2Q8NG84 335 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 BAHD1Q8TBE0 780 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 SLC7A6Q92536 515 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 DVL3Q92997 716 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 PKMYT1Q99640 499 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 ZNF251Q9BRH9 671 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 BARX1Q9HBU1 254 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 FBXO4Q9UKT5 387 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 CRYBG1Q9Y4K1 1723 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 E5RGE8 158 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 PLPP1O14494 284 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 SPI1P17947 270 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 COX5AP20674 150 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 PLA1AQ53H76 456 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 Q6ZSR9 355 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 TMEM130Q8N3G9 435 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 OR1N1Q8NGS0 311 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 SLC37A2Q8TED4 501 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 CMTM3Q96MX0 182 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 TEAD3Q99594 435 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 ZNF2Q9BSG1 426 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 CMC2Q9NRP2 79 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 RYDENQ9NUL5 291 aaKnown RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 NSG2Q9Y328 171 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 FLVCR1Q9Y5Y0 555 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 TIAM2Q8IVF5 1701 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 CHD2O14647 1828 aaKnown RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 FRG2CA6NGY1 282 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 H0Y8G0 127 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 MKRN2OSH3BPM6 223 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 M0R135 149 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 CRYABP02511 175 aaKnown RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 POU2F2P09086 479 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 SBK2P0C263 348 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 MMP11P24347 488 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 ZNF90Q03938 601 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 MYBPHQ13203 477 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 SMIM21Q3B7S5 101 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 ZNF468Q5VIY5 522 aaPredicted RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 TMEM182Q6ZP80 229 aaPredicted RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 VRK3Q8IV63 474 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 TCTE3Q8IZS6 198 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR5AS1Q8N127 324 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 SUMF1Q8NBK3 374 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR10G3Q8NGC4 313 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR5H6Q8NGV6 325 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR51H1Q8NH63 302 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 PDXPQ96GD0 296 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 ZNF799Q96GE5 643 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 REEP6Q96HR9 211 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 NIPSNAP1Q9BPW8 284 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 DHRS9Q9BPW9 319 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 TIMM9Q9Y5J7 89 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 R4GMQ9 66 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR6C68A6NDL8 312 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 H7BYZ3 331 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 NUPL2O15504 423 aaKnown RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 PRKRAO75569 313 aaKnown RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 PNLIPRP2P54317 469 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 RPS16P62249 146 aaKnown RBP5.9□□□□□ -1.47
UPF2-201ENST00000356352 SHBQ15464 509 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 DUSP5Q16690 384 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 ARIH2OSQ8N7S6 290 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR51S1Q8NGJ8 323 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 CHAC2Q8WUX2 184 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 SLC25A19Q9HC21 320 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 LOXL2Q9Y4K0 774 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 OR51B4Q9Y5P0 310 aa5.9□□□□□ -1.47
UPF2-201ENST00000356352 SMIM17P0DL12 118 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ARRB2P32121 409 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CAPZBP47756 277 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CLN3Q13286 438 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 COL9A2Q14055 689 aaPredicted RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 XKR7Q5GH72 579 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SLC16A11Q8NCK7 471 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 OR51E1Q8TCB6 317 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 Q96M85 177 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 C19orf43Q9BQ61 176 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 EDEM2Q9BV94 578 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 GABARAPL3Q9BY60 117 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 OR51I2Q9H344 312 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 LAMB4A4D0S4 1761 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 MYH1P12882 1939 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CXorf51AA0A1B0GTR3 108 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZNF724A8MTY0 619 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SIRPB1O00241 398 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 EFSO43281 561 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 YIF1AO95070 293 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 NXPH3O95157 252 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SDHBP21912 280 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 APEX1P27695 318 aaKnown RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 DIO1P49895 249 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ETV1P50549 477 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CCR6P51684 374 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 PPP1CAP62136 330 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZNF239Q16600 458 aaKnown RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 PNLIPRP3Q17RR3 467 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms