RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CFPP27918 469 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SDHAP31040 664 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 CENPAP49450 140 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SLC7A2P52569 658 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 LSM6P62312 80 aaKnown RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 AQP6Q13520 282 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 FGD3Q5JSP0 725 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 GPR139Q6DWJ6 353 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SLC27A4Q6P1M0 643 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SPICQ8N5J4 248 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 ATG16L2Q8NAA4 619 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SEMA6DQ8NFY4 1073 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 HAVCR1Q96D42 359 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 FAM46AQ96IP4 442 aaKnown RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 NTN4Q9HB63 628 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 DDX28Q9NUL7 540 aaKnown RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 TMEM106BQ9NUM4 274 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 IL19Q9UHD0 177 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 EGFL7Q9UHF1 273 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 PURGQ9UJV8 347 aaKnown RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 PPP1R3CQ9UQK1 317 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 ENPP4Q9Y6X5 453 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 PPIAL4EA0A075B759 164 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 PPIAL4CA0A0B4J2A2 164 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 PPIAL4DF5H284 164 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 NME4O00746 187 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 CDC42EP2O14613 210 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 PRSS23O95084 383 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 SCG5P05408 212 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 PPIAL4FP0DN26 164 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 RHCEP18577 417 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 KITLGP21583 273 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 FUT4P22083 530 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 GSK3BP49841 420 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 NUDT2P50583 147 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 RPS6KA3P51812 740 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 KRR1Q13601 381 aaKnown RBP9.01□□□□□ -0.97
CAPN3-204ENST00000356316 FHL1Q13642 323 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 MESTQ5EB52 335 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 TMEM255AQ5JRV8 349 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 DNM1P34Q6PK57 102 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 VASH1Q7L8A9 365 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-204ENST00000356316 FAM156AQ8NDB6 213 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 GJC3Q8NFK1 279 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 OR1F12Q8NHA8 337 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 CMTM5Q96DZ9 223 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 ZMYND19Q96E35 227 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-204ENST00000356316 MRI1Q9BV20 369 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 SYT4Q9H2B2 425 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 ASH2LQ9UBL3 628 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 COA3Q9Y2R0 106 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-204ENST00000356316 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 STARD10Q9Y365 291 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 IER3IP1Q9Y5U9 82 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 TANC2Q9HCD6 1990 aa9.01□□□□□ -0.97
CAPN3-204ENST00000356316 NBEAL1Q6ZS30 2694 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 A0A1W2PRQ8 180 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 TMEM89A2RUT3 159 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 OR6C6A6NF89 314 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 J3QW42 95 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 IFNL4K9M1U5 179 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 SOCS2O14508 198 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 PTP4A3O75365 173 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 RAC2P15153 192 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 NCK1P16333 377 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 CTLA4P16410 223 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 CRABP1P29762 137 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 RGS6P49758 472 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 SMIM11AP58511 58 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 BTG1P62324 171 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 DGCR6Q14129 220 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 TMEM155Q4W5P6 130 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 ARMCX4Q5H9R4 360 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 GLYATQ6IB77 296 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 PGM2L1Q6PCE3 622 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 HACD2Q6Y1H2 254 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 DPY19L2P2Q6ZN68 376 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 FAM122BQ7Z309 247 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 ADCK1Q86TW2 530 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 LRRC28Q86X40 367 aaPredicted RBP9□□□□□ -0.97
CAPN3-204ENST00000356316 ZNF283Q8N7M2 679 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 OR13G1Q8NGZ3 307 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 SLC7A13Q8TCU3 470 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 C22orf15Q8WYQ4 148 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 POP5Q969H6 163 aaKnown RBP9□□□□□ -0.97
CAPN3-204ENST00000356316 RASD2Q96D21 266 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
CAPN3-204ENST00000356316 ZNF582Q96NG8 517 aaPredicted RBP9□□□□□ -0.97
CAPN3-204ENST00000356316 OR2V2Q96R30 315 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 GPA33Q99795 319 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 SLC6A7Q99884 636 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 CDADC1Q9BWV3 514 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 NUAK2Q9H093 628 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 CCDC134Q9H6E4 229 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 PATZ1Q9HBE1 687 aaKnown RBP9□□□□□ -0.97
CAPN3-204ENST00000356316 NRIP3Q9NQ35 241 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 ADA2Q9NZK5 511 aa9□□□□□ -0.97
CAPN3-204ENST00000356316 GMPR2Q9P2T1 348 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms