RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 EDIL3O43854 480 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 HIST1H1CP16403 213 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ST3GAL2Q16842 350 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 C19orf35Q6ZS72 473 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 STPG2Q8N412 459 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 PIGTQ969N2 578 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 LCORQ96JN0 433 aaPredicted RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 OBP2BQ9NPH6 170 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 GNG12Q9UBI6 72 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 KLK11Q9UBX7 282 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 YTHDF2Q9Y5A9 579 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR10J4P0C629 311 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 HRH1P35367 487 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 FXNQ16595 210 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 DUSP18Q8NEJ0 188 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 GJC3Q8NFK1 279 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR13C5Q8NGS8 318 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 KCNJ15Q99712 375 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 TRAF4Q9BUZ4 470 aaPredicted RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 PRAMEF26H0Y7S4 382 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CNMDO75829 334 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF865P0CJ78 1059 aaPredicted RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 HSD17B7P56937 341 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 SMAD2Q15796 467 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 TIGITQ495A1 244 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 MED25Q71SY5 747 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CMTM2Q8TAZ6 248 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF596Q8TC21 504 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF845Q96IR2 970 aaPredicted RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 UCK1Q9HA47 277 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 TNFRSF12AQ9NP84 129 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 PIGLQ9Y2B2 252 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 HSPB6O14558 160 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CTRB1P17538 263 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 NOVA1P51513 510 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CSNK1G2P78368 415 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CDK5Q00535 292 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 C17orf67Q0P5P2 114 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF528Q3MIS6 628 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CTRB2Q6GPI1 263 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 LRRTM1Q86UE6 522 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 DTWD2Q8NBA8 298 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 MARCH1Q8TCQ1 289 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ARHGDIGQ99819 225 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 TRBV11-1A0A0K0K1C0 115 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 TARM1B6A8C7 271 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 AP4M1O00189 453 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 PRKRAO75569 313 aaKnown RBP11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CST4P01036 141 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 CTSAP10619 480 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 AKR1C3P42330 323 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 HIST1H3AP68431 136 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 C12orf73Q69YU5 71 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 ZNF429Q86V71 674 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
SYNCRIP-201ENST00000355238 A0A087WV62 115 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 SSSCA1O60232 199 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 LRP3O75074 770 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 SBK3P0C264 359 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 PVRP15151 417 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 KRTDAPP60985 99 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 DUSP8Q13202 625 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC25A35Q3KQZ1 300 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 LBHQ53QV2 105 aaPredicted RBP11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 TMEM128Q5BJH2 165 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 ABHD17BQ5VST6 288 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 OLIG3Q7RTU3 272 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 SOX7Q9BT81 388 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 CDC14CA4D256 554 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 LINC00862A6NCI5 91 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 GSTP1P09211 210 aaKnown RBP11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC6A12P48065 614 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 CD300CQ08708 224 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 GSG1Q2KHT4 349 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 FAM122AQ96E09 287 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 PPP1R14DQ9NXH3 145 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 LHX6Q9UPM6 363 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 COA3Q9Y2R0 106 aaPredicted RBP11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 ANKRD61A6NGH8 418 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 CRYBB2P43320 205 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 UBE2G1P62253 170 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 Q6ZSR6 202 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 CALHM3Q86XJ0 350 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 SLC38A6Q8IZM9 456 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 CORO2AQ92828 525 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 CSF3RQ99062 836 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 DNAJC25-GNG10A0A024R161 153 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 OPN1LWP04000 364 aa11.61□□□□□ -0.55
SYNCRIP-201ENST00000355238 Q3ZCU0 254 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms