RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 RAB5AP20339 215 aa5.3□□□□□ -1.56
SRGAP1-201ENST00000355086 APOBEC1P41238 236 aaKnown RBP5.3□□□□□ -1.56
SRGAP1-201ENST00000355086 VWA1Q6PCB0 445 aa5.3□□□□□ -1.56
SRGAP1-201ENST00000355086 PRSS45Q7RTY3 260 aa5.3□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC38A9Q8NBW4 561 aa5.3□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM208Q9BTX3 173 aa5.3□□□□□ -1.56
SRGAP1-201ENST00000355086 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC25A4P12235 298 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC22A12Q96S37 553 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 DNASE2O00115 360 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF628Q5EBL2 1059 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 COX20Q5RI15 118 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TUSC5Q8IXB3 177 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CMTM4Q8IZR5 234 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM40Q8WWA1 233 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 PHYHIPQ92561 330 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 RPUSD4Q96CM3 377 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 LYSMD1Q96S90 227 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ARHGDIGQ99819 225 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 HES4Q9HCC6 221 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CDC34P49427 236 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CMPK2Q5EBM0 449 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TRNP1Q6NT89 227 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 C17orf78Q8N4C9 275 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SORT1Q99523 831 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TAS2R4Q9NYW5 299 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 COA3Q9Y2R0 106 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 HOXD9P28356 352 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ERVFC1-1P60608 527 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 RPL3LQ92901 407 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 NEURL3Q96EH8 262 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CSF3RQ99062 836 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TAAR5O14804 337 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 JTBO76095 146 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ALPLP05186 524 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CYBAP13498 195 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 DAPP51397 102 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 REEP5Q00765 189 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TPBGQ13641 420 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 DGAT2L6Q6ZPD8 337 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 C3orf30Q96M34 536 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CTSFQ9UBX1 484 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TREX1Q9NSU2 369 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CLEC5AQ9NY25 188 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ANKUB1A6NFN9 424 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TNFSF11O14788 317 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TOX4O94842 621 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 GLI4P10075 376 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 FGF7P21781 194 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 VEGFBP49765 207 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 IHHQ14623 411 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 DEFB109BQ30KR1 87 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 NKAIN1Q4KMZ8 207 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC39A7Q92504 469 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 PTBP3O95758 552 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 F11P03951 625 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 PPIAP62937 165 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM123Q8N131 208 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 GABRG1Q8N1C3 465 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 GMPR2Q9P2T1 348 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 NRASP01111 189 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 APEX1P27695 318 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 NAGKQ9UJ70 344 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 DUOX1Q9NRD9 1551 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ATP1B1P05026 303 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SLC35E2P0CK97 266 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 LYPD8Q6UX82 237 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SIAH1Q8IUQ4 282 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 MED1Q15648 1581 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 KRTDAPP60985 99 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TMPRSS11FQ6ZWK6 438 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CABLES2Q9BTV7 478 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 CXorf36Q9H7Y0 433 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ZDHHC11Q9H8X9 412 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 COL3A1P02461 1466 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TGOLN2O43493 480 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 GJB3O75712 270 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF17P17021 662 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 THEM4Q5T1C6 240 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 RPS19BP1Q86WX3 136 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ZDHHC23Q8IYP9 409 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 RBPMSQ93062 196 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 HDAC8Q9BY41 377 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 NIT2Q9NQR4 276 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 PNPP00491 289 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 PDGFAP04085 211 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SMN1Q16637 294 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 RETREG3Q86VR2 466 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 OR2M3Q8NG83 312 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM18Q96B42 140 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 POM121L2Q96KW2 1035 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 TRABD2BA6NFA1 517 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 AREGP15514 252 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SRP9P49458 86 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 ADAMTSL4Q6UY14 1074 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 NKX6-2Q9C056 277 aaPredicted RBP5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 SCN3AQ9NY46 2000 aa5.29□□□□□ -1.56
SRGAP1-201ENST00000355086 PSORS1C1Q9UIG5 152 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms