RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 A6NIZ1 184 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 EFCAB9A8MZ26 197 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 TIMM8AO60220 97 aaPredicted RBP13.36□□□□□ -0.27
PDGFA-201ENST00000354513 IFNA14P01570 189 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 COX5BP10606 129 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 CTLA4P16410 223 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 KITLGP21583 273 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 LIPAP38571 399 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 GPR4P46093 362 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 GSK3BP49841 420 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 RAP1BP61224 184 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 PCBD1P61457 104 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 RAP1AP62834 184 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 SLC3A1Q07837 685 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 ZMYND11Q15326 602 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 DNAL1Q4LDG9 190 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
PDGFA-201ENST00000354513 VASH1Q7L8A9 365 aaPredicted RBP13.36□□□□□ -0.27
PDGFA-201ENST00000354513 ALDH16A1Q8IZ83 802 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 BPIFB2Q8N4F0 458 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 C3orf56Q8N813 242 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
PDGFA-201ENST00000354513 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 DCLRE1CQ96SD1 692 aaKnown RBP13.36□□□□□ -0.27
PDGFA-201ENST00000354513 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 KCTD14Q9BQ13 255 aaPredicted RBP13.36□□□□□ -0.27
PDGFA-201ENST00000354513 ELOVL3Q9HB03 270 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 TBCCD1Q9NVR7 557 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 STARD10Q9Y365 291 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 PPIAL4AQ9Y536 164 aa13.36□□□□□ -0.27
PDGFA-201ENST00000354513 ELOVL7A1L3X0 281 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 C12orf71A8MTZ7 269 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 A8MXK9 166 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 DOK2O60496 412 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 ABHD16AO95870 558 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 ZNF12P17014 697 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 HTR5AP47898 357 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 SLC9A3P48764 834 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 TRAM2Q15035 370 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 UNQ6126/PRO20091Q6UXV3 157 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 OAFQ86UD1 273 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 BCL6BQ8N143 479 aaPredicted RBP13.35□□□□□ -0.27
PDGFA-201ENST00000354513 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 SIGLECL1Q8N7X8 197 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 ITLN1Q8WWA0 313 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 ACOT11Q8WXI4 607 aaPredicted RBP13.35□□□□□ -0.27
PDGFA-201ENST00000354513 RASD2Q96D21 266 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 ZMYND19Q96E35 227 aaPredicted RBP13.35□□□□□ -0.27
PDGFA-201ENST00000354513 PATZ1Q9HBE1 687 aaKnown RBP13.35□□□□□ -0.27
PDGFA-201ENST00000354513 ZNF69Q9UC07 566 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 EGFL7Q9UHF1 273 aa13.35□□□□□ -0.27
PDGFA-201ENST00000354513 NDRG4Q9ULP0 352 aaKnown RBP13.35□□□□□ -0.27
PDGFA-201ENST00000354513 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
PDGFA-201ENST00000354513 TEX13CA0A0J9YWL9 993 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 GSTA4O15217 222 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 FOXH1O75593 365 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 CD14P08571 375 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 SBK2P0C263 348 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 SLC6A9P48067 706 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 ARHGDIAP52565 204 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 PAX2Q02962 417 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 ZNF154Q13106 437 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 ANKDD1AQ495B1 522 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 TMEM155Q4W5P6 130 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 CCDC92Q53HC0 331 aaPredicted RBP13.34□□□□□ -0.27
PDGFA-201ENST00000354513 ZMAT1Q5H9K5 638 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 TMPRSS11FQ6ZWK6 438 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 MBOAT2Q6ZWT7 520 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 DOK3Q7L591 496 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 ARHGAP24Q8N264 748 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 OR2Z1Q8NG97 314 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 ST7LQ8TDW4 575 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 POP5Q969H6 163 aaKnown RBP13.34□□□□□ -0.27
PDGFA-201ENST00000354513 SAMD8Q96LT4 415 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 THTPAQ9BU02 230 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 INSIG2Q9Y5U4 225 aa13.34□□□□□ -0.27
PDGFA-201ENST00000354513 PRSS37A4D1T9 235 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 DNAJC9-AS1A6NH13 148 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 SGCEO43556 437 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.28
PDGFA-201ENST00000354513 IFNW1P05000 195 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 DBHP09172 617 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 HKR1P10072 659 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 HSD17B1P14061 328 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 MMP16P51512 607 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 BTG1P62324 171 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 ZSCAN26Q16670 478 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 SPATS1Q496A3 300 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 CBLL1Q75N03 491 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 LRRC28Q86X40 367 aaPredicted RBP13.33□□□□□ -0.28
PDGFA-201ENST00000354513 CMBLQ96DG6 245 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 ZNF570Q96NI8 536 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 WACQ9BTA9 647 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms