RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 MIDNQ504T8 468 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 AWAT1Q58HT5 328 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 SEMA6DQ8NFY4 1073 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 TERB2Q8NHR7 220 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 LRIT1Q9P2V4 623 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 C19orf53Q9UNZ5 99 aaPredicted RBP12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 SLC17A2O00624 439 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 CYB5BO43169 146 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 XRCC2O43543 280 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 DIRAS3O95661 229 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 CRABP1P29762 137 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 ZNF93P35789 620 aaPredicted RBP12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 CD96P40200 585 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 RPS21P63220 83 aaKnown RBP12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 ZNF239Q16600 458 aaKnown RBP12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 CLEC12BQ2HXU8 276 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 CST9Q5W186 159 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 RPL7L1Q6DKI1 246 aaKnown RBP12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 OR2A2Q6IF42 318 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 OR1J1Q8NGS3 322 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 SOSTQ9BQB4 213 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 C1orf123Q9NWV4 160 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 AMDHD2Q9Y303 409 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 RTTNQ86VV8 2226 aa12.91□□□□□ -0.34
DNMT3B-204ENST00000353855 CENPVL1A0A0U1RR11 272 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 LOC107986453A0A1B0GWG9 222 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 OGG1O15527 345 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ZGLP1P0C6A0 271 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 EPHA1P21709 976 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 P2RY2P41231 377 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 PABPC1L2AQ5JQF8 200 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ADIPOR2Q86V24 386 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 OR4N2Q8NGD1 307 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 JAM3Q9BX67 310 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 PIPOXQ9P0Z9 390 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 MRPS28Q9Y2Q9 187 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 TMED7Q9Y3B3 224 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 A0A0U1RQK1 487 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ZNF587BE7ETH6 402 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 F5H5K5 113 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 AP4M1O00189 453 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 SLC25A38Q96DW6 304 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 JTBO76095 146 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ABLIM3O94929 683 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 THBS2P35442 1172 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 DUSP2Q05923 314 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 GUK1Q16774 197 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ZNF776Q68DI1 518 aaPredicted RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 OR2T2Q6IF00 324 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 GLIPR1L1Q6UWM5 242 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 ZNF442Q9H7R0 627 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 PRDM7Q9NQW5 492 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 GAB2Q9UQC2 676 aa12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 KIAA0100Q14667 2235 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-204ENST00000353855 C9orf170A2RU37 121 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 YIF1AO95070 293 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 NXPH3O95157 252 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 DHPSP49366 369 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 FAM199XQ6PEV8 388 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 PGLYRP3Q96LB9 341 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 NXF5Q9H1B4 397 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 KLRF1Q9NZS2 232 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 ST6GALNAC2Q9UJ37 374 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 C7orf77A4D0Y5 90 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 HSD11B2P80365 405 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 RAB32Q13637 225 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 PHLDA2Q53GA4 152 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 TMEM104Q8NE00 496 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 HHIPQ96QV1 700 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 SYT3Q9BQG1 590 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 SEC11CQ9BY50 192 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 RAB33BQ9H082 229 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 OR2W5A6NFC9 320 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 ZNF724A8MTY0 619 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 GALR3O60755 368 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 RAD51DO75771 328 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 MRPS34P82930 218 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 TLE3Q04726 772 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 TGIF1Q15583 401 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 DCXRQ7Z4W1 244 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 WDR34Q96EX3 536 aa12.89□□□□□ -0.35
DNMT3B-204ENST00000353855 MBNL1Q9NR56 388 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms