RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DEFB128Q7Z7B8 93 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 ASB17Q8WXJ9 295 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SAT2Q96F10 170 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 C14orf144Q96I85 54 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 IGSF21Q96ID5 467 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 S100A13Q99584 98 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF426Q9BUY5 554 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 RNF126Q9BV68 326 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SLC17A9Q9BYT1 436 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 NRSN2Q9GZP1 204 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CYTL1Q9NRR1 136 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 OR1A2Q9Y585 309 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TRPM6Q9BX84 2022 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 ARGFXA6NJG6 315 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 H0YIZ8 118 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF354AO60765 605 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 GNALP38405 381 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 CAMLGP49069 296 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 RBP2P50120 134 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SSBP1Q04837 148 aaKnown RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 RAB32Q13637 225 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 MEP1BQ16820 701 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 MIDNQ504T8 468 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 NSUN5P2Q63ZY6 315 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ULK3Q6PHR2 472 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 CDRT4Q8N9R6 151 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 TEX101Q9BY14 249 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SLCO5A1Q9H2Y9 848 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 TRBV5-5A0A0J9YX44 114 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 HOXA2O43364 376 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 OR10H2O60403 315 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 PLGP00747 810 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 IGHV2-5P01817 119 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF735P0CB33 412 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ELNP15502 786 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 CMPK1P30085 196 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 TSFMP43897 325 aaKnown RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 STARD6P59095 220 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 HMGN3Q15651 99 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 AWAT2Q6E213 333 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 DRAM2Q6UX65 266 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 DPPA2Q7Z7J5 298 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 AVL9Q8NBF6 648 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 OR56B1Q8NGI3 324 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ADAMTS17Q8TE56 1095 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SLC25A36Q96CQ1 311 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF587Q96SQ5 575 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 CDC6Q99741 560 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 VN1R3Q9BXE9 311 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 KNL1Q8NG31 2342 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ANAPC1Q9H1A4 1944 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 MPDZO75970 2070 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 C11orf98E9PRG8 122 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SLC31A2O15432 143 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 CCL16O15467 120 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 B3GALT2O43825 422 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 DNAJB6O75190 326 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 RENP00797 406 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 PRNPP04156 253 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SLC35G6P0C7Q6 338 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 CYBAP13498 195 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF84P51523 738 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 RAP1AP62834 184 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 GPR18Q14330 331 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 GAMTQ14353 236 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SURF2Q15527 256 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 GUK1Q16774 197 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF658BQ4V348 819 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ALG10Q5BKT4 473 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 DNM1P46Q6ZS02 220 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 ADGRE4PQ86SQ3 457 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM104Q8NE00 496 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 OR51A2Q8NGJ7 313 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 OR14K1Q8NGZ2 314 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SLC39A7Q92504 469 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 DCBLD2Q96PD2 775 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 TCEAL2Q9H3H9 227 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SPHK2Q9NRA0 654 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 FBXL21Q9UKT6 434 aa6.88□□□□□ -1.31
BRCA1-201ENST00000352993 SNRNP200O75643 2136 aaKnown RBP6.88□□□□□ -1.31
BRCA1-201ENST00000352993 A0A1B0GTQ1 180 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 EFSO43281 561 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 MOSPD3O75425 235 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 G0S2P27469 103 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CX3CR1P49238 355 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 BIKQ13323 160 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 METRNLQ641Q3 311 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 PRSS35Q8N3Z0 413 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 OR52E1Q8NGJ3 308 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 MARS2Q96GW9 593 aaKnown RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 POM121Q96HA1 1249 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 LINC00615Q96LM1 132 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 TGM7Q96PF1 710 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 DCAF16Q9NXF7 216 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 MAFFQ9ULX9 164 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 LSM5Q9Y4Y9 91 aaKnown RBP6.87□□□□□ -1.31
BRCA1-201ENST00000352993 CNTRLQ7Z7A1 2325 aa6.87□□□□□ -1.31
BRCA1-201ENST00000352993 HTTP42858 3142 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms