RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SLC35B4Q969S0 331 aa16.91■□□□□ 0.3
UBE3C-201ENST00000348165 SLCO5A1Q9H2Y9 848 aa16.91■□□□□ 0.3
UBE3C-201ENST00000348165 CHRM2P08172 466 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 TRAPPC2P0DI81 140 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 TRAPPC2BP0DI82 140 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
UBE3C-201ENST00000348165 DRD3P35462 400 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 FOXF1Q12946 379 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 LPCAT3Q6P1A2 487 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 MRGPRX4Q96LA9 322 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 GABARAPL1Q9H0R8 117 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 OR6C6A6NF89 314 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 CADM4Q8NFZ8 388 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 ST8SIA4Q92187 359 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 DUSP21Q9H596 190 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 SLC22A13Q9Y226 551 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 MBTPS2O43462 519 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 SERPINF1P36955 418 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 GDPD3Q7L5L3 318 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 FAM122BQ7Z309 247 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 KLHDC8BQ8IXV7 354 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 SCCPDHQ8NBX0 429 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 OR4Q3Q8NH05 313 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 OXGR1Q96P68 337 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 TXNIPQ9H3M7 391 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 BCO1Q9HAY6 547 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 EXO1Q9UQ84 846 aaKnown RBP16.9■□□□□ 0.3
UBE3C-201ENST00000348165 NUP214P35658 2090 aaPredicted RBP16.9■□□□□ 0.3
UBE3C-201ENST00000348165 IGHV5-51A0A0C4DH38 117 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 CLDN1O95832 211 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 GLI4P10075 376 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 ERVMER34-1Q9H9K5 563 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 GPR84Q9NQS5 396 aa16.9■□□□□ 0.3
UBE3C-201ENST00000348165 C5orf49A4QMS7 147 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 TNFSF11O14788 317 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 FADS1O60427 444 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 CCR9P51686 369 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 TFF2Q03403 129 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 IAH1Q2TAA2 248 aaPredicted RBP16.89■□□□□ 0.29
UBE3C-201ENST00000348165 PRSS41Q7RTY9 318 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 SUMF1Q8NBK3 374 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 POC1BQ8TC44 478 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 ROBO4Q8WZ75 1007 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 ST8SIA2Q92186 375 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 SLC25A46Q96AG3 418 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 CDCA4Q9BXL8 241 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 ZNF355PQ9NSJ1 428 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 KCNG2Q9UJ96 466 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 NDUFB7P17568 137 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 HOXC8P31273 242 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 OR1M1Q8NGA1 313 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 OR2I1PQ8NGU4 316 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 SEC22CQ9BRL7 303 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 PLCXD1Q9NUJ7 323 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 SPINT2O43291 252 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 MED6O75586 246 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 DEFB108BQ8NET1 73 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 OR51S1Q8NGJ8 323 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 OR51F2Q8NH61 342 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 CPNE4Q96A23 557 aaPredicted RBP16.89■□□□□ 0.29
UBE3C-201ENST00000348165 RBMXL1Q96E39 390 aaKnown RBP16.89■□□□□ 0.29
UBE3C-201ENST00000348165 SPACA9Q96E40 222 aaPredicted RBP16.89■□□□□ 0.29
UBE3C-201ENST00000348165 LUZP4Q9P127 313 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 LRRC30A6NM36 301 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 CYB5BO43169 146 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 MPLP40238 635 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 PLA2G7Q13093 441 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 ZNF468Q5VIY5 522 aaPredicted RBP16.89■□□□□ 0.29
UBE3C-201ENST00000348165 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 SUMF2Q8NBJ7 301 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 DUS3LQ96G46 650 aaKnown RBP16.89■□□□□ 0.29
UBE3C-201ENST00000348165 KIRREL1Q96J84 757 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 KIAA1551Q9HCM1 1747 aa16.89■□□□□ 0.29
UBE3C-201ENST00000348165 OR8G1Q15617 311 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 OVCH1Q7RTY7 1134 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 ANKRD9Q96BM1 317 aaPredicted RBP16.88■□□□□ 0.29
UBE3C-201ENST00000348165 SIGLEC11Q96RL6 698 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 MKRN2OSH3BPM6 223 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 NXPH3O95157 252 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 SIX6O95475 246 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 ELK1P19419 428 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 DMRTC1Q5HYR2 192 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 OR4A16Q8NH70 328 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 OPALINQ96PE5 141 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 GPATCH2Q9NW75 528 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 RAB27BO00194 218 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 LALBAP00709 142 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 TGFBR1P36897 503 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 PRSS36Q5K4E3 855 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 ANKRD16Q6P6B7 361 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 TTC9Q92623 222 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 UBL7Q96S82 380 aaPredicted RBP16.88■□□□□ 0.29
UBE3C-201ENST00000348165 CBR3O75828 277 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 FAM157BP0CG42 384 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 ZNF133P52736 654 aaPredicted RBP16.88■□□□□ 0.29
UBE3C-201ENST00000348165 SPEM2Q0P670 501 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 EBPQ15125 230 aaKnown RBP16.88■□□□□ 0.29
UBE3C-201ENST00000348165 TRILQ7L0X0 811 aa16.88■□□□□ 0.29
UBE3C-201ENST00000348165 PPP1R14DQ9NXH3 145 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms