RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ST7LQ8TDW4 575 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 LRFN5Q96NI6 719 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 KIAA1549LQ6ZVL6 1849 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 HOXA2O43364 376 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 DUS4LO95620 317 aaKnown RBP13.82□□□□□ -0.2
LMNA-201ENST00000347559 PMP2P02689 132 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 PAX6P26367 422 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 ACTBL2Q562R1 376 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 CSNK1A1LQ8N752 337 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 SMARCD2Q92925 531 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 C4orf45Q96LM5 186 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 PRO1933Q9H354 126 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 METTL8Q9H825 291 aaKnown RBP13.82□□□□□ -0.2
LMNA-201ENST00000347559 ELOVL3Q9HB03 270 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 DHDHQ9UQ10 334 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 MPDZO75970 2070 aa13.82□□□□□ -0.2
LMNA-201ENST00000347559 A0A087WV62 115 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 IL2RAP01589 272 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 SELPP16109 830 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 TLX1P31314 330 aaPredicted RBP13.81□□□□□ -0.2
LMNA-201ENST00000347559 RUNX2Q13950 521 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 PNLIPRP3Q17RR3 467 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 ASB17Q8WXJ9 295 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 MAFIPQ8WZ33 124 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 DNAJB12Q9NXW2 375 aaKnown RBP13.81□□□□□ -0.2
LMNA-201ENST00000347559 TSPAN15O95858 294 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 IFNA17P01571 189 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 CCR2P41597 374 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 ZNF616Q08AN1 781 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 SLCO5A1Q9H2Y9 848 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 GFOD1Q9NXC2 390 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 CKLFQ9UBR5 152 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 ARPC3O15145 178 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 CCL16O15467 120 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 NME2P1O60361 137 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 PLGP00747 810 aaPredicted RBP13.81□□□□□ -0.2
LMNA-201ENST00000347559 SULT1A1P50225 295 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 RIDAP52758 137 aaKnown RBP13.81□□□□□ -0.2
LMNA-201ENST00000347559 RASGEF1BQ0VAM2 473 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 RAB32Q13637 225 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 MEP1BQ16820 701 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 ITPRIPL2Q3MIP1 535 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 TMEM225Q6GV28 225 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 ASPHD2Q6ICH7 369 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 EIF5AL1Q6IS14 154 aaKnown RBP13.81□□□□□ -0.2
LMNA-201ENST00000347559 CDC20BQ86Y33 519 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 ARRDC1Q8N5I2 433 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 OR10D4PQ8NGN7 298 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 DUSP22Q9NRW4 184 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 LRRK1Q38SD2 2015 aa13.81□□□□□ -0.2
LMNA-201ENST00000347559 PRAMEF26H0Y7S4 382 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 PRNPP04156 253 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 CT62P0C5K7 136 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 GRK6P43250 576 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 ARRB1P49407 418 aaPredicted RBP13.8□□□□□ -0.2
LMNA-201ENST00000347559 CYCSP99999 105 aaKnown RBP13.8□□□□□ -0.2
LMNA-201ENST00000347559 SSX2Q16385 188 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 BTNL8Q6UX41 500 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 GATSQ8NAP1 163 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
LMNA-201ENST00000347559 FBXL21Q9UKT6 434 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 MMP24Q9Y5R2 645 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 TRPM6Q9BX84 2022 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 CXorf51AA0A1B0GTR3 108 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 CDK3Q00526 305 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 FCRL6Q6DN72 434 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 DEFB128Q7Z7B8 93 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 RBM18Q96H35 190 aaKnown RBP13.8□□□□□ -0.2
LMNA-201ENST00000347559 OPA3Q9H6K4 179 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 MYO7AQ13402 2215 aa13.8□□□□□ -0.2
LMNA-201ENST00000347559 FGF17O60258 216 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 SFTPBP07988 381 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 ALOX5APP20292 161 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 NPY4RP50391 375 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 CCR4P51679 360 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 UNQ6494/PRO21346Q6UXR6 183 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 VN1R4Q7Z5H5 301 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 ADGRE4PQ86SQ3 457 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 OR8D1Q8WZ84 308 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 SSX3Q99909 188 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 GAR1Q9NY12 217 aaKnown RBP13.79□□□□□ -0.2
LMNA-201ENST00000347559 MED19A0JLT2 244 aaPredicted RBP13.79□□□□□ -0.2
LMNA-201ENST00000347559 FAM157AC9JC47 383 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 FGF19O95750 216 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 CMPK1P30085 196 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 TSFMP43897 325 aaKnown RBP13.79□□□□□ -0.2
LMNA-201ENST00000347559 CX3CR1P49238 355 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 DPTQ07507 201 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 DMWDQ09019 674 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 NSUN5P2Q63ZY6 315 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 AWAT2Q6E213 333 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 ZDHHC22Q8N966 263 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 MFSD9Q8NBP5 474 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 NUDT9Q9BW91 350 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 NMES1Q9C002 83 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms