RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 S1PR5Q9H228 398 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 FABP7O15540 132 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 ST8SIA3O43173 380 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 HOXD12P35452 270 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 VWA2Q5GFL6 755 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 TMEM81Q6P7N7 255 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 UBAC2Q8NBM4 344 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 DLL4Q9NR61 685 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 ASH2LQ9UBL3 628 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 C7orf72A4D263 438 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 FGF17O60258 216 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 TMEM102Q8N9M5 508 aaPredicted RBP21.06■□□□□ 0.96
NPAS3-201ENST00000346562 C8orf44Q96CB5 159 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 TAAR6Q96RI8 345 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 KCNG2Q9UJ96 466 aa21.06■□□□□ 0.96
NPAS3-201ENST00000346562 I6L893 689 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-201ENST00000346562 ACKR1Q16570 336 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 ZDHHC23Q8IYP9 409 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF2Q9BSG1 426 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-201ENST00000346562 CTSFQ9UBX1 484 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 SLC17A4Q9Y2C5 497 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-201ENST00000346562 A0A1W2PR48 441 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 APEX1P27695 318 aaKnown RBP21.05■□□□□ 0.96
NPAS3-201ENST00000346562 GABRG1Q8N1C3 465 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 MED9Q9NWA0 146 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 HSPB2A8KAH6 182 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 EMP3P54852 163 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 EGR3Q06889 387 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 HSPB2Q16082 182 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 BPIFCQ8NFQ6 507 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 OR13F1Q8NGS4 319 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 BARX1Q9HBU1 254 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-201ENST00000346562 SLC5A6Q9Y289 635 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 MYH8P13535 1937 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 TIAM2Q8IVF5 1701 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 A0A1W2PNR3 127 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 SSX9Q7RTT3 188 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 DEFB108BQ8NET1 73 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 SFT2D1Q8WV19 159 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 CLEC1BQ9P126 229 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 CACFD1Q9UGQ2 172 aa21.05■□□□□ 0.96
NPAS3-201ENST00000346562 A0A1W2PPC4 97 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 CMTM4Q8IZR5 234 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 FOXQ1Q9C009 403 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 TMEM129A0AVI4 362 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 FRG2CA6NGY1 282 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 CRYABP02511 175 aaKnown RBP21.04■□□□□ 0.96
NPAS3-201ENST00000346562 SLC7A5P1Q8MH63 180 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 OR2AK2Q8NG84 335 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 OR51S1Q8NGJ8 323 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 TAAR9Q96RI9 348 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 GMPR2Q9P2T1 348 aaKnown RBP21.04■□□□□ 0.96
NPAS3-201ENST00000346562 A0A096LPE4 126 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 A0A1W2PPZ6 126 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 XKRY2A2RUG3 117 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 SPI1P17947 270 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 OR52H1Q8NGJ2 320 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 APH1BQ8WW43 257 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 C11orf54Q9H0W9 315 aaPredicted RBP21.04■□□□□ 0.96
NPAS3-201ENST00000346562 BTN1A1Q13410 526 aa21.04■□□□□ 0.96
NPAS3-201ENST00000346562 TERTO14746 1132 aaKnown RBP21.03■□□□□ 0.96
NPAS3-201ENST00000346562 SNCGO76070 127 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 FAM157BP0CG42 384 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 SPEM1Q8N4L4 309 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 COMMD5Q9GZQ3 224 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF816-ZNF321PA0A0X1KG74 233 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 CHEK1O14757 476 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 TAAR5O14804 337 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 SBK2P0C263 348 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 AVPI1Q5T686 147 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 GFRALQ6UXV0 394 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 ZNF620Q6ZNG0 422 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 ARIH2OSQ8N7S6 290 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 MAFAQ8NHW3 353 aaPredicted RBP21.03■□□□□ 0.96
NPAS3-201ENST00000346562 FAM122AQ96E09 287 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 SIAEQ9HAT2 523 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 GFYI3L273 518 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 CXCL13O43927 109 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 FOXC1Q12948 553 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 FCN2Q15485 313 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 M1APQ8TC57 530 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 POLR2IP36954 125 aaKnown RBP21.03■□□□□ 0.96
NPAS3-201ENST00000346562 TMEM182Q6ZP80 229 aaPredicted RBP21.03■□□□□ 0.96
NPAS3-201ENST00000346562 OR10G3Q8NGC4 313 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 CXCL16Q9H2A7 254 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 PPT2Q9UMR5 302 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 OR2A25A4D2G3 310 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 OR2J2O76002 312 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 DUSP2Q05923 314 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 LIPNQ5VXI9 398 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 RGS7BPQ6MZT1 257 aaPredicted RBP21.03■□□□□ 0.96
NPAS3-201ENST00000346562 TMUB2Q71RG4 321 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 PDCD1LG2Q9BQ51 273 aa21.03■□□□□ 0.96
NPAS3-201ENST00000346562 TPBGQ13641 420 aa21.02■□□□□ 0.96
NPAS3-201ENST00000346562 SHBQ15464 509 aa21.02■□□□□ 0.96
NPAS3-201ENST00000346562 A0A087WV62 115 aa21.02■□□□□ 0.96
NPAS3-201ENST00000346562 CCDC187A0A096LP49 1063 aa21.02■□□□□ 0.96
NPAS3-201ENST00000346562 ANKRD61A6NGH8 418 aa21.02■□□□□ 0.96
NPAS3-201ENST00000346562 PRRT4C9JH25 899 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms