RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 KIAA0895LQ68EN5 471 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TMEM136Q6ZRR5 245 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 GPR32P1Q8NGA4 272 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 UTP4Q969X6 686 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 GPX7Q96SL4 187 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 ORAI2Q96SN7 254 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 NAA50Q9GZZ1 169 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 ZFP30Q9Y2G7 519 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CYC1P08574 325 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 POU2F2P09086 479 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CR2P20023 1033 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 IL3RAP26951 378 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CD1CP29017 333 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SERTAD2Q14140 314 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SUSD1Q6UWL2 747 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 FBXL6Q8N531 539 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR2T10Q8NGZ9 312 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 KHSRPQ92945 711 aaKnown RBP eCLIP5.68□□□□□ -1.5
VCAN-203ENST00000343200 SORT1Q99523 831 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SLC30A3Q99726 388 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ALKBH7Q9BT30 221 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 ADAMTSL3P82987 1691 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 RAB29O14966 203 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CA2P00918 260 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PTHP01270 115 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ARRB2P32121 409 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CSNK1A1P48729 337 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PRRX1P54821 245 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SH3BP2P78314 561 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 DMRTA1Q5VZB9 504 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR7E24Q6IFN5 339 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR52N1Q8NH53 320 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ARRDC2Q8TBH0 407 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 GHSRQ92847 366 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 DAZLQ92904 295 aaKnown RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 GAS2L1Q99501 681 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 OPN3Q9H1Y3 402 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 PLEKHF2Q9H8W4 249 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 POLMQ9NP87 494 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 DMRT3Q9NQL9 472 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MAFBQ9Y5Q3 323 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 A0A087WV62 115 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PLSCR5A0PG75 271 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ANTXRLA6NF34 631 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CRYM-AS1A6NIL9 109 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 FAM74A7A6NL05 159 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SOCS6O14544 535 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 GLSO94925 669 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 TMIGD3P0DMS9 266 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 NRLP54845 237 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CTXN1P60606 82 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PLCXD2Q0VAA5 305 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 GPR18Q14330 331 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 DHRS7BQ6IAN0 325 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 PRICKLE2Q7Z3G6 844 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 LYG2Q86SG7 212 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 STPG2Q8N412 459 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SPICQ8N5J4 248 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 C2orf15Q8WU43 125 aaKnown RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 LIPHQ8WWY8 451 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PMS2P1A4D2B8 440 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SOWAHBA6NEL2 793 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SGK494L7N484 410 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SYN3O14994 580 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 NRASP01111 189 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 HRASP01112 189 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 KRASP01116 189 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 EPHX1P07099 455 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CHRM4P08173 479 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SMIM18P0DKX4 95 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 C8orf89P0DMQ9 161 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 HIST1H1BP16401 226 aaKnown RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 NPY1RP25929 384 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 EPHA2P29317 976 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 LIPAP38571 399 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 ADPRHP54922 357 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 DOC2BQ14184 412 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OR2W3Q7Z3T1 314 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MFSD4AQ8N468 514 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MTMR14Q8NCE2 650 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TTC9Q92623 222 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 RIMS4Q9H426 269 aaPredicted RBP5.68□□□□□ -1.5
VCAN-203ENST00000343200 LPAR3Q9UBY5 353 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PCDHGC4Q9Y5F7 938 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PRAMEF25A6NGN4 478 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 OOEPA6NGQ2 149 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 SPATA31C2B4DYI2 1134 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 M0R3E3 92 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 KCNAB3O43448 404 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 CA12O43570 354 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 LIMS3P0CW19 117 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 LIMS4P0CW20 117 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 HRH1P35367 487 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 GDF5P43026 501 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 MTCP1P56278 107 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 RGNQ15493 299 aa5.68□□□□□ -1.5
VCAN-203ENST00000343200 TMEM241Q24JQ0 296 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms