RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 KIR2DL1P43626 348 aaPredicted RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 PPT1P50897 306 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 RAG2P55895 527 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 TSC22D1Q15714 1073 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 MOGAT1Q96PD6 335 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 DNTTIP1Q9H147 329 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 GAREM1Q9H706 876 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SDHAF2Q9NX18 166 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ANKRD10Q9NXR5 420 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 PADI1Q9ULC6 663 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CCDC163A0A0D9SF12 145 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CENPVL1A0A0U1RR11 272 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 EPHA1P21709 976 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 GPR85P60893 370 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CDONQ4KMG0 1287 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 FJX1Q86VR8 437 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ZNF611Q8N823 705 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 RELL2Q8NC24 303 aaPredicted RBP6.51□□□□□ -1.37
VCAN-202ENST00000342785 OR52B4Q8NGK2 314 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 CPT1CQ8TCG5 803 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 GPR84Q9NQS5 396 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 SLC22A11Q9NSA0 550 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 OR5V1Q9UGF6 321 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 R4GMQ9 66 aa6.51□□□□□ -1.37
VCAN-202ENST00000342785 IGHV5-51A0A0C4DH38 117 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 IGKV1-8A0A0C4DH67 115 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 MED6O75586 246 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 SNAPINO95295 136 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 HOXC4P09017 264 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 MSL3P1P0C860 447 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 GLI4P10075 376 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ALOX5APP20292 161 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ZNF117Q03924 483 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ZNF141Q15928 474 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 WDR38Q5JTN6 314 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 DOK3Q7L591 496 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 OR1S1Q8NH92 325 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 HLA-CQ95604 372 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 RPS10P5Q9NQ39 176 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 MRPS18AQ9NVS2 196 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 PCYT1BQ9Y5K3 369 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 GPR179Q6PRD1 2367 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 NRG2O14511 850 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 OR4E1P0C645 316 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 SRFP11831 508 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 MYF5P13349 255 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 PI3P19957 117 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 LIMS1P48059 325 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ZNF169Q14929 603 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 PXDC1Q5TGL8 231 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 CHRDL2Q6WN34 429 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 NLRC3Q7RTR2 1065 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 PRR18Q8N4B5 295 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 TAAR8Q969N4 342 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 NKX3-1Q99801 234 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 YBX2Q9Y2T7 364 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 LSM2Q9Y333 95 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 CACNA1GO43497 2377 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 TOR1AO14656 332 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 IMPA2O14732 288 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 TPOP07202 933 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 SELENOVP59797 346 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 RPS18P62269 152 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 RNF4P78317 190 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 RPL19P84098 196 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 PLA2G7Q13093 441 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 EBPQ15125 230 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 PCK2Q16822 640 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 TSEN54Q7Z6J9 526 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 PRSS35Q8N3Z0 413 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 HSD17B11Q8NBQ5 300 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 CMTM3Q96MX0 182 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 NXF2Q9GZY0 626 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 OR51B6Q9H340 312 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 PPP1R3EQ9H7J1 279 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 SLC23A1Q9UHI7 598 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 UNC13CQ8NB66 2214 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 CYR61O00622 381 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 BET1O15155 118 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 RGS11O94810 467 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 GLSO94925 669 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 TGM6O95932 706 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 F10P00742 488 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ICAM2P13598 275 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 GLULP15104 373 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 RAB6AP20340 208 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 MSR1P21757 451 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 NME2P22392 152 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 P2RX3P56373 397 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ST3GAL2Q16842 350 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 DMRTC1Q5HYR2 192 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 MAML2Q8IZL2 1156 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 WWTR1Q9GZV5 400 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 LHX9Q9NQ69 397 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 LUZP4Q9P127 313 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms