RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 F10P00742 488 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 SULT1A3P0DMM9 295 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 SULT1A4P0DMN0 295 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 PRSS3P35030 304 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 CLDN6P56747 220 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 CFAP77Q6ZQR2 320 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 CHMP1BQ7LBR1 199 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 FTMTQ8N4E7 242 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 OR13C9Q8NGT0 318 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 SPACA9Q96E40 222 aaPredicted RBP9.22□□□□□ -0.93
LIMA1-201ENST00000341247 ZNF436Q9C0F3 470 aaPredicted RBP9.22□□□□□ -0.93
LIMA1-201ENST00000341247 PTGES2Q9H7Z7 377 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 PLEKHA1Q9HB21 404 aa9.22□□□□□ -0.93
LIMA1-201ENST00000341247 A0A1B0GVI7 797 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 A0A1W2PPC1 479 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 A0A1W2PQ72 361 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TMEM235A6NFC5 223 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 RER1O15258 196 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TOX3O15405 576 aaPredicted RBP9.21□□□□□ -0.93
LIMA1-201ENST00000341247 CSRP1P21291 193 aaKnown RBP9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TAF13Q15543 124 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 KLHL24Q6TFL4 600 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TMED4Q7Z7H5 227 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 RTN4RL2Q86UN3 420 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 LIX1LQ8IVB5 337 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 WDSUB1Q8N9V3 476 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 CHST4Q8NCG5 386 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 OR4D6Q8NGJ1 314 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 SLC22A8Q8TCC7 542 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 CYYR1Q96J86 154 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 ACTR6Q9GZN1 396 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 CHST6Q9GZX3 395 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 RANBP3Q9H6Z4 567 aaPredicted RBP9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TMEM138Q9NPI0 162 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 ALKBH4Q9NXW9 302 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 ASH2LQ9UBL3 628 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 MEIKINA0A087WXM9 373 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 H7C417 338 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 SULT1B1O43704 296 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 HRGP04196 525 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 PSMA6P60900 246 aaKnown RBP9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TSPAN5P62079 268 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 RPS18P62269 152 aaKnown RBP9.21□□□□□ -0.93
LIMA1-201ENST00000341247 NKPD1Q17RQ9 610 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 TRIM61Q5EBN2 209 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.93
LIMA1-201ENST00000341247 FAM186AA6NE01 2351 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 CENPBD1B2RD01 187 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 SYT7O43581 403 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 IGHMP01871 453 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 ACSM4P0C7M7 580 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 VSIG10L2P0DP72 767 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 MFSD13AQ14CX5 517 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 LGALSLQ3ZCW2 172 aaPredicted RBP9.21□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 OR4S1Q8NGB4 309 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 OR52N4Q8NGI2 321 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 OR51E1Q8TCB6 317 aa9.21□□□□□ -0.94
LIMA1-201ENST00000341247 FAM71F1Q96KD3 344 aaPredicted RBP9.21□□□□□ -0.94
LIMA1-201ENST00000341247 PRMT8Q9NR22 394 aaPredicted RBP9.21□□□□□ -0.94
LIMA1-201ENST00000341247 C19orf25Q9UFG5 118 aaPredicted RBP9.21□□□□□ -0.94
LIMA1-201ENST00000341247 SULT2B1O00204 365 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 ICMTO60725 284 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 NOS1APO75052 506 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 KLK3P07288 261 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF43P17038 809 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 HSD11B1P28845 292 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 SCGB2B2Q4G0G5 96 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 RAET1LQ5VY80 246 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 TCEAL6Q6IPX3 200 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 C3orf33Q6P1S2 294 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 FDX2Q6P4F2 183 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 OR2M3Q8NG83 312 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 OR10S1Q8NGN2 331 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 TTC9Q92623 222 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 TCEAL3Q969E4 200 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 ADAT3Q96EY9 351 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 B3GALT5Q9Y2C3 310 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 CIB4A0PJX0 185 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 CCL3P10147 92 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 ABOP16442 354 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 POU4F3Q15319 338 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 SGCAQ16586 387 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 C2orf68Q2NKX9 166 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 METTL11BQ5VVY1 283 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 C5orf46Q6UWT4 87 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 C17orf107Q6ZR85 190 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 NPRL2Q8WTW4 380 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 MRGPRX4Q96LA9 322 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 MRI1Q9BV20 369 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 TINAGL1Q9GZM7 467 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 EXO5Q9H790 373 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 ARID1AO14497 2285 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 NAP1L6A6NFF2 107 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 CREBL2O60519 120 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 NDUFB6O95139 128 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 TTRP02766 147 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 QDPRP09417 244 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 PTGS2P35354 604 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms