RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 C9orf135Q5VTT2 229 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 CD200R1LQ6Q8B3 271 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 ABHD12BQ7Z5M8 362 aaPredicted RBP15.27■□□□□ 0.04
CLDN4-201ENST00000340958 GJC3Q8NFK1 279 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 OR2G2Q8NGZ5 317 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 TMEM38BQ9NVV0 291 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 CLCF1Q9UBD9 225 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF281Q9Y2X9 895 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 EMC9Q9Y3B6 208 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF878C9JN71 531 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 GPRIN2O60269 458 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 CDRT1O95170 752 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 GALP22466 123 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 FGF9P31371 208 aaPredicted RBP15.27■□□□□ 0.03
CLDN4-201ENST00000340958 PER3P56645 1201 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 MXD1Q05195 221 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 FAPQ12884 760 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF829Q3KNS6 432 aaPredicted RBP15.27■□□□□ 0.03
CLDN4-201ENST00000340958 ACSM3Q53FZ2 586 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 FAM27BQ5VT28 67 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF813Q6ZN06 617 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 FOXL2NBQ6ZUU3 175 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 LINGO2Q7L985 606 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 GCNT2Q8N0V5 402 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 CNEP1R1Q8N9A8 125 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 DYNC2LI1Q8TCX1 351 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 WNT2BQ93097 391 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 NABP1Q96AH0 204 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 TPK1Q9H3S4 243 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 BRD7Q9NPI1 651 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 SNTG1Q9NSN8 517 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 FRRS1LQ9P0K9 344 aa15.27■□□□□ 0.03
CLDN4-201ENST00000340958 TMEM269A0A1B0GVZ9 245 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 TMEM212A6NML5 194 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 CASKO14936 926 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 ZFPL1O95159 310 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 CD1AP06126 327 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 ABOP16442 354 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 OPRL1P41146 370 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 ACSF3Q4G176 576 aaPredicted RBP15.26■□□□□ 0.03
CLDN4-201ENST00000340958 YIF1BQ5BJH7 314 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 OR2A2Q6IF42 318 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 PAMR1Q6UXH9 720 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 SLC16A14Q7RTX9 510 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 ADGRE4PQ86SQ3 457 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 OR13C5Q8NGS8 318 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 DCLRE1CQ96SD1 692 aaKnown RBP15.26■□□□□ 0.03
CLDN4-201ENST00000340958 FBXL3Q9UKT7 428 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 N6AMT1Q9Y5N5 214 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 R4GMQ9 66 aa15.26■□□□□ 0.03
CLDN4-201ENST00000340958 PRRC2CQ9Y520 2896 aaKnown RBP15.25■□□□□ 0.03
CLDN4-201ENST00000340958 LOC110117498-PIK3R3F6TDL0 507 aa15.25■□□□□ 0.03
CLDN4-201ENST00000340958 SS18L1O75177 396 aaPredicted RBP15.25■□□□□ 0.03
CLDN4-201ENST00000340958 MYL9P24844 172 aa15.25■□□□□ 0.03
CLDN4-201ENST00000340958 ENDOGQ14249 297 aaKnown RBP15.25■□□□□ 0.03
CLDN4-201ENST00000340958 TMEM91Q6ZNR0 172 aa15.25■□□□□ 0.03
CLDN4-201ENST00000340958 SLC22A24Q8N4F4 322 aa15.25■□□□□ 0.03
CLDN4-201ENST00000340958 FIGNL2A6NMB9 653 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 GABRA1P14867 456 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 SDC2P34741 201 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 PCBD1P61457 104 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 GRB2P62993 217 aaKnown RBP15.24■□□□□ 0.03
CLDN4-201ENST00000340958 ARF1P84077 181 aaKnown RBP15.24■□□□□ 0.03
CLDN4-201ENST00000340958 GALK2Q01415 458 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 MFGE8Q08431 387 aaPredicted RBP15.24■□□□□ 0.03
CLDN4-201ENST00000340958 WDR38Q5JTN6 314 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 PRSS35Q8N3Z0 413 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 C4orf45Q96LM5 186 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 PLEK2Q9NYT0 353 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 PRSS50Q9UI38 385 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 SLC5A6Q9Y289 635 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 A0A1W2PPK0 400 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 B8ZZF3 427 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 CLPXO76031 633 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 CST2P09228 141 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 RPS19P39019 145 aaKnown RBP15.24■□□□□ 0.03
CLDN4-201ENST00000340958 RORCP51449 518 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 BCL2L15Q5TBC7 163 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 FAM214BQ7L5A3 538 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 LUZP2Q86TE4 346 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 CD163Q86VB7 1156 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 Q8NA96 180 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 C9orf106Q8NAJ2 232 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 OR10S1Q8NGN2 331 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 MCFD2Q8NI22 146 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 OR14A2Q96R54 314 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 ATF6BQ99941 703 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 NIPAL2Q9H841 368 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 RNF121Q9H920 327 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 OR52A1Q9UKL2 312 aa15.24■□□□□ 0.03
CLDN4-201ENST00000340958 PHF3Q92576 2039 aaKnown RBP15.23■□□□□ 0.03
CLDN4-201ENST00000340958 H3BSH0 61 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 WDR1O75083 606 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 GATBO75879 557 aaKnown RBP15.23■□□□□ 0.03
CLDN4-201ENST00000340958 PNPP00491 289 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 IL1AP01583 271 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 OCM2P0CE71 109 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 CCR9P51686 369 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 PRKXP51817 358 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 SCRN3Q0VDG4 424 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms