RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 HMSDA8MTL9 139 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 PRAMEF26H0Y7S4 382 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 TOR1AO14656 332 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 NSA2O95478 260 aaKnown RBP12.93□□□□□ -0.34
CPSF7-201ENST00000340437 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 GALNTL5Q7Z4T8 443 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 FJX1Q86VR8 437 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 BPIFCQ8NFQ6 507 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 OR13C9Q8NGT0 318 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 PAQR8Q8TEZ7 354 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 MRPS24Q96EL2 167 aaKnown RBP12.93□□□□□ -0.34
CPSF7-201ENST00000340437 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 PDE7BQ9NP56 450 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 SPTY2D1-AS1A0A0U1RR47 76 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 RFPL4AA6NLU0 287 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 OR5K4A6NMS3 321 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 RFPL4AL1F8VTS6 287 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 AHSA1O95433 338 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 CSF2RBP32927 897 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 DMWDQ09019 674 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF169Q14929 603 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-201ENST00000340437 GPX7Q96SL4 187 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-201ENST00000340437 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 KLK13Q9UKR3 277 aa12.93□□□□□ -0.34
CPSF7-201ENST00000340437 FADS1O60427 444 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 IL33O95760 270 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 IGHV4-34P06331 123 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 H2BFMP0C1H6 154 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 PPP1R1AQ13522 171 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 PAPD4Q6PIY7 484 aaKnown RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 THAP6Q8TBB0 222 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 GPX8Q8TED1 209 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 NPRL2Q8WTW4 380 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 TMPRSS13Q9BYE2 586 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 CST11Q9H112 138 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF275Q9NSD4 429 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 HHLA2Q9UM44 414 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 TRAV36DV7A0A075B6V5 113 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 PMS2P2O95744 297 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 F12P00748 615 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 RPL35P42766 123 aaKnown RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 PPICP45877 212 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 EPHA4P54764 986 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 HSD17B7P56937 341 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 POU3F1Q03052 451 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 LY6G6FQ5SQ64 297 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 INO80EQ8NBZ0 244 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 ARPC5LQ9BPX5 153 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 PTGES2Q9H7Z7 377 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 A0A0B4J2A0 478 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 DISC1C4P0D8 188 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 GLO1Q04760 184 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 HYAL1Q12794 435 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 ARL5BQ96KC2 179 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
CPSF7-201ENST00000340437 SHPKQ9UHJ6 478 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 VSIG4Q9Y279 399 aa12.92□□□□□ -0.34
CPSF7-201ENST00000340437 NPIPA5E9PKD4 350 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 HRH1P35367 487 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 BAMBIQ13145 260 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 SLC9A3R2Q15599 337 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 C1orf140Q5VVS0 124 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 LANCL3Q6ZV70 420 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
CPSF7-201ENST00000340437 RNF128Q8TEB7 428 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 TCTN2Q96GX1 697 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 TMEM41AQ96HV5 264 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 FOXQ1Q9C009 403 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 CUTCQ9NTM9 273 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 GPN3Q9UHW5 284 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-201ENST00000340437 OR52A1Q9UKL2 312 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 NPIPA1Q9UND3 350 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 A8MXK9 166 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 PGCP20142 388 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 DHODHQ02127 395 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 OR52H1Q8NGJ2 320 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 MAFIPQ8WZ33 124 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 BANF2Q9H503 90 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 DZANK1Q9NVP4 752 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 GSKIPQ9P0R6 139 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 CFAP54Q96N23 3096 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 BGLAPP02818 100 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 ERCC1P07992 297 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-201ENST00000340437 HOXC4P09017 264 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-201ENST00000340437 FGF2P09038 288 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 ISXQ2M1V0 245 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 OR2W3Q7Z3T1 314 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 RNF144BQ7Z419 303 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 OR52N4Q8NGI2 321 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 OR5D18Q8NGL1 313 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 ROBO4Q8WZ75 1007 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 CELSR3Q9NYQ7 3312 aa12.91□□□□□ -0.34
CPSF7-201ENST00000340437 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 METTL21EPA6NDL7 271 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 GPR31O00270 319 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 MPGP29372 298 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 SERTAD2Q14140 314 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms