RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 GNG12Q9UBI6 72 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CTSFQ9UBX1 484 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC5A6Q9Y289 635 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ESPL1Q14674 2120 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CKAP5Q14008 2032 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 LOC107986453A0A1B0GWG9 222 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 WDR1O75083 606 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ZIC2O95409 532 aaPredicted RBP7.94□□□□□ -1.14
RTN3-202ENST00000339997 OR4E1P0C645 316 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 PTGER4P35408 488 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 FABP6P51161 128 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 EDDM3AQ14507 147 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CYHR1Q6ZMK1 362 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC38A6Q8IZM9 456 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 MFSD4AQ8N468 514 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TERB2Q8NHR7 220 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 METTL9Q9H1A3 318 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 KLHL42Q9P2K6 505 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TBC1D29Q9UFV1 150 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 HLA-HP01893 362 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 MAP2K6P52564 334 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 CDC20Q12834 499 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 SSX1Q16384 188 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 VWA2Q5GFL6 755 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 HACD4Q5VWC8 232 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 OR4N2Q8NGD1 307 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ZDHHC5Q9C0B5 715 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 GAREM1Q9H706 876 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 SFXN1Q9H9B4 322 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 GPR173Q9NS66 373 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 CUTCQ9NTM9 273 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ANKRD30BLA7E2S9 258 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 DSCR3O14972 297 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 C1QCP02747 245 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 F11P03951 625 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 HNRNPA1P09651 372 aaKnown RBP eCLIP7.93□□□□□ -1.14
RTN3-202ENST00000339997 DAOP14920 347 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ATF1P18846 271 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 CXCL3P19876 107 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 FCGR2CP31995 323 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ATP1B3P54709 279 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 PMP22Q01453 160 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 IFITM3Q01628 133 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ST3GAL2Q16842 350 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 MORN1Q5T089 497 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 LANCL3Q6ZV70 420 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ADGRE4PQ86SQ3 457 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 C10orf111Q8N326 155 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 SLC22A24Q8N4F4 322 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 AMER3Q8N944 861 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 OR8D4Q8NGM9 314 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 OR5M8Q8NGP6 311 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 OR1J2Q8NGS2 313 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 APH1BQ8WW43 257 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 FAM3CQ92520 227 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 RDH5Q92781 318 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 UCN3Q969E3 161 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 RAB39BQ96DA2 213 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 MS4A6EQ96DS6 147 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 SHDQ96IW2 340 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 C10orf90Q96M02 699 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ZNF2Q9BSG1 426 aaPredicted RBP7.93□□□□□ -1.14
RTN3-202ENST00000339997 ADAM19Q9H013 955 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 KCNIP2Q9NS61 270 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 SPATA6Q9NWH7 488 aaPredicted RBP7.93□□□□□ -1.14
RTN3-202ENST00000339997 DUSP13Q9UII6 198 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 SHROOM3Q8TF72 1996 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 C20orf202A1L168 122 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 CST7O76096 145 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 GLCEO94923 617 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 GIPP09681 153 aaPredicted RBP7.93□□□□□ -1.14
RTN3-202ENST00000339997 BMP5P22003 454 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 PSMB6P28072 239 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 RABIFP47224 123 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 HSD17B7P56937 341 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 TAS2R46P59540 309 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 TMEM268Q5VZI3 342 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 CA5BP1Q8WTZ4 195 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 MITD1Q8WV92 249 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 CNRIP1Q96F85 164 aaPredicted RBP7.93□□□□□ -1.14
RTN3-202ENST00000339997 SLC25A21Q9BQT8 299 aaPredicted RBP7.93□□□□□ -1.14
RTN3-202ENST00000339997 GABARAPL3Q9BY60 117 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 STRADBQ9C0K7 418 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 ESRP2Q9H6T0 727 aaKnown RBP7.93□□□□□ -1.14
RTN3-202ENST00000339997 CALHM2Q9HA72 323 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 PRR13Q9NZ81 148 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 KIF25Q9UIL4 384 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 PRUNE2Q8WUY3 3088 aa7.93□□□□□ -1.14
RTN3-202ENST00000339997 A0A1W2PPQ1 181 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 A0A1W2PR80 420 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 J3QR89 54 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 PRSS23O95084 383 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 MYOGP15173 224 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ABOP16442 354 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 SUOXP51687 545 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 RAB35Q15286 201 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 SPANXN5Q5MJ07 72 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 ABHD17BQ5VST6 288 aa7.92□□□□□ -1.14
RTN3-202ENST00000339997 DPY19L2P2Q6ZN68 376 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms