RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 FAM72BQ86X60 149 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 NKAIN3Q8N8D7 197 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 NPY6RQ99463 290 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 ADGRL4Q9HBW9 690 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 SPHK2Q9NRA0 654 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 ING1Q9UK53 422 aaPredicted RBP11.81□□□□□ -0.52
USP47-202ENST00000339865 BOKQ9UMX3 212 aaPredicted RBP11.81□□□□□ -0.52
USP47-202ENST00000339865 B3GALT5Q9Y2C3 310 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 CEP170BQ9Y4F5 1589 aaPredicted RBP11.81□□□□□ -0.52
USP47-202ENST00000339865 PPLO60437 1756 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
USP47-202ENST00000339865 AIFM1O95831 613 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 ATP1B1P05026 303 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 ACHEP22303 614 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 RABIFP47224 123 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 TFAP2EQ6VUC0 442 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 CLDN22Q8N7P3 220 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
USP47-202ENST00000339865 ZCCHC11Q5TAX3 1644 aaKnown RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 SLC5A10A0PJK1 596 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 FITM1A5D6W6 292 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 E5RGE8 158 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 TPOP07202 933 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CALCBP10092 127 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 DDOSTP39656 456 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 STUMQ69YW2 141 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CYHR1Q6ZMK1 362 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 OR1J2Q8NGS2 313 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 OR13F1Q8NGS4 319 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 SDK2Q58EX2 2172 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CCDC187A0A096LP49 1063 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 TOX3O15405 576 aaPredicted RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 FPR3P25089 353 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 TMEM135Q86UB9 458 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 OR10C1Q96KK4 312 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 ACPTQ9BZG2 426 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 RNF24Q9Y225 148 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 IQGAP1P46940 1657 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CR2P20023 1033 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CD200P41217 278 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 PLXDC2Q6UX71 529 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 TSEN54Q7Z6J9 526 aaKnown RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 NAXDQ8IW45 347 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 OR2AE1Q8NHA4 323 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CBLCQ9ULV8 474 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 TMEM221A6NGB7 291 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 HOXC11O43248 304 aaPredicted RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 GJB5O95377 273 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CCR7P32248 378 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 MTNR1BP49286 362 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 SPCS3P61009 180 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 GAL3ST2Q9H3Q3 398 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 A3GALT2U3KPV4 340 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 BCAT2O15382 392 aaPredicted RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 FBP1P09467 338 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 GPR17Q13304 367 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 ZNF141Q15928 474 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 LBHQ53QV2 105 aaPredicted RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 LANCL2Q9NS86 450 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 PRSS1P07477 247 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 CCR9P51686 369 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 HENMT1Q5T8I9 393 aaKnown RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 ZADH2Q8N4Q0 377 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 TMEM102Q8N9M5 508 aaPredicted RBP11.8□□□□□ -0.52
USP47-202ENST00000339865 ZNF680Q8NEM1 530 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 PRR7Q8TB68 274 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 FZD8Q9H461 694 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 PRDM7Q9NQW5 492 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 NPTNQ9Y639 398 aa11.8□□□□□ -0.52
USP47-202ENST00000339865 A0A0A6YYC8 382 aaPredicted RBP11.79□□□□□ -0.52
USP47-202ENST00000339865 NSG1A0A0A6YYJ2 146 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 I3L1I5 382 aaPredicted RBP11.79□□□□□ -0.52
USP47-202ENST00000339865 ZNF264O43296 627 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 TCN2P20062 427 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 COX5AP20674 150 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 FDXRP22570 491 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 GJA4P35212 333 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 OR3A1P47881 315 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 CST6Q15828 149 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 Q499Y3 187 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 RANBP10Q6VN20 620 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 AAMDCQ9H7C9 122 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
USP47-202ENST00000339865 HTR6P50406 440 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 DEFB133Q30KQ1 61 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 PRAMEF20Q5VT98 475 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 LILRB1Q8NHL6 650 aaPredicted RBP11.79□□□□□ -0.52
USP47-202ENST00000339865 EDEM2Q9BV94 578 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 SLC17A9Q9BYT1 436 aa11.79□□□□□ -0.52
USP47-202ENST00000339865 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms