RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 C1orf174Q8IYL3 243 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 THEM6Q8WUY1 208 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 POM121L2Q96KW2 1035 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 DCLRE1CQ96SD1 692 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 CNN2Q99439 309 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 MNTQ99583 582 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 COQ7Q99807 217 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 RASSF4Q9H2L5 321 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 CENPMQ9NSP4 180 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 DNAJC27Q9NZQ0 273 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 ATPIF1Q9UII2 106 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 TMEM14AQ9Y6G1 99 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 HSPE1-MOB4S4R3N1 261 aa10.32□□□□□ -0.76
SPTLC1-202ENST00000337841 ANKHD1Q8IWZ3 2542 aaKnown RBP10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 LOC100509620A0A075B734 347 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 ATP6V1G2-DDX39BF2Z307 99 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 HS3ST1O14792 307 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 SYNGR3O43761 229 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 SELENOFO60613 162 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 CCL2P13500 99 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 PRF1P14222 555 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 NR4A1P22736 598 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 PCSK6P29122 969 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 CALCRP30988 508 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 VHLP40337 213 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 NAA10P41227 235 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 SLC15A1P46059 708 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 HSPA13P48723 471 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 FABP6P51161 128 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 UCP2P55851 309 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 HGFACQ04756 655 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF691Q5VV52 312 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 RHOUQ7L0Q8 258 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 MYPOPQ86VE0 399 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 ENTHD1Q8IYW4 607 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 C8orf59Q8N0T1 100 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 NUP37Q8NFH4 326 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 KBTBD8Q8NFY9 601 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 OTOSQ8NHW6 89 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 TFAP2CQ92754 450 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 FBXW5Q969U6 566 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 SPTSSAQ969W0 71 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 MAP6Q96JE9 813 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 DHRS9Q9BPW9 319 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 ABHD6Q9BV23 337 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 PLEKHF2Q9H8W4 249 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 UBTD1Q9HAC8 227 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 ELOVL3Q9HB03 270 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 FAIMQ9NVQ4 179 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 LAMP5Q9UJQ1 280 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 GRIP1Q9Y3R0 1128 aa10.31□□□□□ -0.76
SPTLC1-202ENST00000337841 E7EQL1 145 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 APOC1P02654 83 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 LYNP07948 512 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 MRPL3P09001 348 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 GABRB1P18505 474 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 ALOX5APP20292 161 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 APOBEC3AP31941 199 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 GLRXP35754 106 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 RPS27P42677 84 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 MTNR1AP48039 350 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 AQP4P55087 323 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 TPTEP56180 551 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 PRSS12P56730 875 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 RPS23P62266 143 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 SPOCK1Q08629 439 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 GGTLC2Q14390 218 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 MAD2L1BPQ15013 274 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF544Q6NX49 715 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 KCTD18Q6PI47 426 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 C20orf204Q6ZNR8 217 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 CFAP77Q6ZQR2 320 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 FBXL14Q8N1E6 418 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF611Q8N823 705 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 OR51G2Q8NGK0 314 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 LILRB1Q8NHL6 650 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 ASB17Q8WXJ9 295 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 NEUROG1Q92886 237 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 SLAMF6Q96DU3 332 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 COG8Q96MW5 612 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 ATF6BQ99941 703 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 BCL2L14Q9BZR8 327 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 RPL36Q9Y3U8 105 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 PCDHGB1Q9Y5G3 927 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 COL12A1Q99715 3063 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 PKDREJQ9NTG1 2253 aa10.3□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF878C9JN71 531 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF670-ZNF695F2Z2N8 137 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 F5H5K5 113 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 PHYHO14832 338 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 CLIC3O95833 236 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 ABHD16AO95870 558 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 LCKP06239 509 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 H2BFMP0C1H6 154 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SBK2P0C263 348 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 OR2T7P0C7T2 308 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 TUBG1P23258 451 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 THBS4P35443 961 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms