RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TCTEX1D1Q8N7M0 179 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DTWD2Q8NBA8 298 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 OR2AE1Q8NHA4 323 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MARCH1Q8TCQ1 289 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MZB1Q8WU39 189 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 EMG1Q92979 244 aaKnown RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 BLACEA4D250 179 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 CRYM-AS1A6NIL9 109 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 GALR3O60755 368 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 NOVA1P51513 510 aaKnown RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TOMM34Q15785 309 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MIDNQ504T8 468 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 M1APQ8TC57 530 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TM4SF18Q96CE8 201 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TXNRD2Q9NNW7 524 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 PSENENQ9NZ42 101 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MYH15Q9Y2K3 1946 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 OR5H15A6NDH6 313 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 OR5H1A6NKK0 313 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DEGS1O15121 323 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SULT1A3P0DMM9 295 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SULT1A4P0DMN0 295 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TAS2R45P59539 299 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 RTP2Q5QGT7 225 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 NCMAPQ5T1S8 102 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 UBTD2Q8WUN7 234 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 IL22RA2Q969J5 263 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DTD2Q96FN9 168 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 MAGT1Q9H0U3 335 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 COA3Q9Y2R0 106 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DRGXA6NNA5 263 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF732B4DXR9 585 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SPINT2O43291 252 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 C1SP09871 688 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 EDDM3BP56851 147 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TGFBR3Q03167 851 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 DLEU7Q6UYE1 221 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 OR10P1Q8NGE3 313 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 SLC46A1Q96NT5 459 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 TINAGL1Q9GZM7 467 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-201ENST00000334504 GLIPR2Q9H4G4 154 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 ACER3Q9NUN7 267 aa8.98□□□□□ -0.97
COL4A6-201ENST00000334504 UTS2O95399 124 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 DOC2BQ14184 412 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 C11orf87Q6NUJ2 197 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 GALNT16Q8N428 558 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR10G3Q8NGC4 313 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 CPEB1Q9BZB8 566 aaKnown RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR7C2O60412 319 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 RRASP10301 218 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 AMTP48728 403 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 EDDM3AQ14507 147 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR2B11Q5JQS5 317 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ACSM5Q6NUN0 579 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 AAED1Q7RTV5 226 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 BTLAQ7Z6A9 289 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 LRRTM3Q86VH5 581 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 NKAIN4Q8IVV8 208 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 NTNG1Q9Y2I2 539 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 FZD9O00144 591 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 XRCC2O43543 280 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 SEMA4FO95754 770 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 CD14P08571 375 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 COX5AP20674 150 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 SLC35A1P78382 337 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 FAM26DQ5JW98 314 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF468Q5VIY5 522 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR11L1Q8NGX0 322 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 HLA-CQ95604 372 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 TIMM29Q9BSF4 260 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 C16orf70Q9BSU1 422 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 LHX6Q9UPM6 363 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 PTRH2Q9Y3E5 179 aaKnown RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 TAPBPO15533 448 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF17P17021 662 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF280AP59817 542 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 DCAF7P61962 342 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 RPL11P62913 178 aaKnown RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 MLF2Q15773 248 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 LINC00303Q3SY05 128 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 FA2HQ7L5A8 372 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR5M1Q8NGP8 315 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 BLNKQ8WV28 456 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 NUDCD2Q8WVJ2 157 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ZC3HAV1LQ96H79 300 aaKnown RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 CXorf58Q96LI9 332 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 LOC107986453A0A1B0GWG9 222 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 RPLP1P05386 114 aaKnown RBP8.97□□□□□ -0.97
COL4A6-201ENST00000334504 NTSR1P30989 418 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 RGRP47804 291 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF154Q13106 437 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 LIPNQ5VXI9 398 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 Q6ZN92 141 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR2W3Q7Z3T1 314 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 OR4C16Q8NGL9 310 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 MEGF10Q96KG7 1140 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 CMTM3Q96MX0 182 aa8.97□□□□□ -0.97
COL4A6-201ENST00000334504 TRAF4Q9BUZ4 470 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms