RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HGDQ93099 445 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 MS4A7Q9GZW8 240 aaPredicted RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 SLC22A13Q9Y226 551 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 U3KQ87 197 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 TO15178 435 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 DNASE1P24855 282 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 CCR6P51684 374 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 GDPGP1Q6ZNW5 385 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 CFAP77Q6ZQR2 320 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 ST8SIA2Q92186 375 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 GHSRQ92847 366 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 WDFY2Q96P53 400 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 FAM173AQ9BQD7 235 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 TTTY12Q9BZ98 90 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 TAS2R5Q9NYW4 299 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 MCTS1Q9ULC4 181 aaKnown RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 ZMIZ1Q9ULJ6 1067 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 RAXQ9Y2V3 346 aa14.18□□□□□ -0.14
PDGFB-201ENST00000331163 KLF13Q9Y2Y9 288 aaPredicted RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 EXOSC1Q9Y3B2 195 aaKnown RBP14.18□□□□□ -0.14
PDGFB-201ENST00000331163 GATBO75879 557 aaKnown RBP14.17□□□□□ -0.14
PDGFB-201ENST00000331163 LALBAP00709 142 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 ELK1P19419 428 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 SLC35A1P78382 337 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 EXOSC2Q13868 293 aaKnown RBP14.17□□□□□ -0.14
PDGFB-201ENST00000331163 C19orf48Q6RUI8 117 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 IZUMO1Q8IYV9 350 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 PLEKHA1Q9HB21 404 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 DIABLOQ9NR28 239 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 LSM2Q9Y333 95 aaKnown RBP14.17□□□□□ -0.14
PDGFB-201ENST00000331163 EMC9Q9Y3B6 208 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 PCDHGB7Q9Y5F8 929 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 PRSS37A4D1T9 235 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 PLPP3O14495 311 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 CCL2P13500 99 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 DAP3P51398 398 aaKnown RBP14.17□□□□□ -0.14
PDGFB-201ENST00000331163 SNRPGP62308 76 aaKnown RBP14.17□□□□□ -0.14
PDGFB-201ENST00000331163 TNK1Q13470 666 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 DNM1P34Q6PK57 102 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 JAGN1Q8N5M9 183 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 GPER1Q99527 375 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 ATMQ13315 3056 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 NAGAP17050 411 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 GIFP27352 417 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 LAP3P28838 519 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 AKR1D1P51857 326 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 MFAP5Q13361 173 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 PDSS1Q5T2R2 415 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 LIPNQ5VXI9 398 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 MZT2AQ6P582 158 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 MRPL48Q96GC5 212 aaKnown RBP14.17□□□□□ -0.14
PDGFB-201ENST00000331163 SPACA5Q96QH8 159 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 TMEM43Q9BTV4 400 aa14.17□□□□□ -0.14
PDGFB-201ENST00000331163 NBL1P41271 181 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 TAGLNQ01995 201 aaKnown RBP14.16□□□□□ -0.14
PDGFB-201ENST00000331163 MFSD13AQ14CX5 517 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 TSC22D1Q15714 1073 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 SERPINA12Q8IW75 414 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 ZNF441Q8N8Z8 693 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 OR2T35Q8NGX2 323 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 THAP7Q9BT49 309 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-201ENST00000331163 NUP50Q9UKX7 468 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 COPS3Q9UNS2 423 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 PTPN13Q12923 2485 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 ZNF891A8MT65 544 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-201ENST00000331163 MKRN2OSH3BPM6 223 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 SP1P08047 785 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 ANXA3P12429 323 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 LIMK1P53667 647 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 PIP4P1Q86T03 277 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 FTMTQ8N4E7 242 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 PSMF1Q92530 271 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 OR14A2Q96R54 314 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 BABAM2Q9NXR7 383 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 TRGV5A0A0B4J1U4 118 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 LGALS8O00214 317 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 CFDP00746 253 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-201ENST00000331163 LIMS3P0CW19 117 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 LIMS4P0CW20 117 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 TMEM65Q6PI78 240 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 ESPNLQ6ZVH7 1005 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 BHLHE23Q8NDY6 225 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 RFT1Q96AA3 541 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 CRLF2Q9HC73 371 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 TCF7L1Q9HCS4 588 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 BAIAP2Q9UQB8 552 aa14.16□□□□□ -0.14
PDGFB-201ENST00000331163 SHISA3A0PJX4 238 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 LIPT2A6NK58 231 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 EEF1E1-BLOC1S5C9J1V9 151 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 TM4SF5O14894 197 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 RER1O15258 196 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 SIGLEC5O15389 551 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 EVX1P49640 407 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 GDI2P50395 445 aaKnown RBP14.15□□□□□ -0.14
PDGFB-201ENST00000331163 AADACL4Q5VUY2 407 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 SFRP4Q6FHJ7 346 aaPredicted RBP14.15□□□□□ -0.14
PDGFB-201ENST00000331163 NPEPL1Q8NDH3 523 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 OR11H7Q8NGC8 314 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 COQ8AQ8NI60 647 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms