RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SEC16AO15027 2179 aa13.76□□□□□ -0.21
BRCC3-201ENST00000330045 TRAV14DV4A0A0A6YYC5 116 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 A0A0A6YYH2 397 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 LOC107986453A0A1B0GWG9 222 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 A6NJ64 397 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 METTL12A8MUP2 240 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 BET1O15155 118 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 LDLRAD4O15165 306 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 SPDEFO95238 335 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF735P0CB33 412 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF823P16415 610 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 CD38P28907 300 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
BRCC3-201ENST00000330045 MOGAT2Q3SYC2 334 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 OR10K2Q6IF99 312 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 BPIFB2Q8N4F0 458 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 EDAQ92838 391 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 DMRTA2Q96SC8 542 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 RAB33BQ9H082 229 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 SHARPINQ9H0F6 387 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
BRCC3-201ENST00000330045 G6PC2Q9NQR9 355 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 FBXL2Q9UKC9 423 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 OR52A1Q9UKL2 312 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 FARSAQ9Y285 508 aaKnown RBP13.75□□□□□ -0.21
BRCC3-201ENST00000330045 A0A1W2PR77 199 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 LGALS8O00214 317 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF217O75362 1048 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 CD74P04233 296 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ISG15P05161 165 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 FGF2P09038 288 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 FBLP22087 321 aaKnown RBP13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ACHEP22303 614 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 PTGS2P35354 604 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ARL4DP49703 201 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 SQSTM1Q13501 440 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 NR0B2Q15466 257 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ATPAF1Q5TC12 328 aaPredicted RBP13.75□□□□□ -0.21
BRCC3-201ENST00000330045 TMEM81Q6P7N7 255 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 DCXRQ7Z4W1 244 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF546Q86UE3 836 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 STEAP2Q8NFT2 490 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF304Q9HCX3 659 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF107Q9UII5 783 aaPredicted RBP13.75□□□□□ -0.21
BRCC3-201ENST00000330045 FREM3P0C091 2139 aa13.75□□□□□ -0.21
BRCC3-201ENST00000330045 RHPN2P1A8MT19 583 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 IL11P20809 199 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 RGS19P49795 217 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 SCGB2B2Q4G0G5 96 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 C1orf100Q5SVJ3 147 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF704Q6ZNC4 412 aaPredicted RBP13.74□□□□□ -0.21
BRCC3-201ENST00000330045 BEST3Q8N1M1 668 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 BVESQ8NE79 360 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 SLC26A10Q8NG04 563 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 OR1J2Q8NGS2 313 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 OR1L3Q8NH93 324 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF230Q9UIE0 474 aaPredicted RBP13.74□□□□□ -0.21
BRCC3-201ENST00000330045 KIF26BQ2KJY2 2108 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 RP1P56715 2156 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 TMEM269A0A1B0GVZ9 245 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 TMEM235A6NFC5 223 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 FTCDNL1E5RQL4 147 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 TEX46H3BTG2 121 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 TSPAN4O14817 238 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 PDGFBP01127 241 aaPredicted RBP13.74□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF28P17035 718 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 AGTR1P30556 359 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 CSNK1EP49674 416 aaKnown RBP13.74□□□□□ -0.21
BRCC3-201ENST00000330045 HSD11B2P80365 405 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 BTN1A1Q13410 526 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 C5orf46Q6UWT4 87 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 HSD17B13Q7Z5P4 300 aaPredicted RBP13.74□□□□□ -0.21
BRCC3-201ENST00000330045 LINC00346Q8IVM7 164 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF441Q8N8Z8 693 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 PTX4Q96A99 478 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 EDEM2Q9BV94 578 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 B3GNT4Q9C0J1 378 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 KLK13Q9UKR3 277 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 MKL2Q9ULH7 1088 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 MRPS17Q9Y2R5 130 aaKnown RBP13.74□□□□□ -0.21
BRCC3-201ENST00000330045 CABIN1Q9Y6J0 2220 aa13.74□□□□□ -0.21
BRCC3-201ENST00000330045 LOC390937A0A1W2PQ73 354 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 A6NIZ1 184 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 MS4A18H0YCH9 400 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 NUDT21O43809 227 aaKnown RBP13.73□□□□□ -0.21
BRCC3-201ENST00000330045 LMX1BO60663 402 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 RLN2P04090 185 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 CD27P26842 260 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 RAP1BP61224 184 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 RAP1AP62834 184 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 FMODQ06828 376 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 FGL1Q08830 312 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 DHRS2Q13268 280 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 MS4A18Q3C1V0 323 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 TMEM244Q5VVB8 128 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF584Q8IVC4 421 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 NKAIN3Q8N8D7 197 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms