RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CCL21O00585 134 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 DVL2O14641 736 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 LYZL6O75951 148 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 H2BFMP0C1H6 154 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 CPEP16870 476 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF32P17041 273 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 BMP5P22003 454 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 TGFBR2P37173 567 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 LIPAP38571 399 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 TGM4P49221 684 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 TPBGQ13641 420 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 GABRA6Q16445 453 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 TBRG1Q3YBR2 411 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 HIKESHIQ53FT3 197 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 CCDC92Q53HC0 331 aaPredicted RBP8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 ELFN2Q5R3F8 820 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 LIPNQ5VXI9 398 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 OR7E24Q6IFN5 339 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF474Q6S9Z5 364 aaPredicted RBP8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 MRGPRGQ86SM5 289 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 CXorf67Q86X51 503 aaPredicted RBP8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 NANOS1Q8WY41 292 aaKnown RBP8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 YIPF6Q96EC8 236 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 BBC3Q96PG8 261 aaPredicted RBP8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 OR2H1Q9GZK4 316 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 HDHD2Q9H0R4 259 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 CENPMQ9NSP4 180 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 GALNT8Q9NY28 637 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 ST6GALNAC2Q9UJ37 374 aa8.96□□□□□ -0.97
VIPAS39-201ENST00000327028 SGCEO43556 437 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 RAD51DO75771 328 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 UBL3O95164 117 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 RGS6P49758 472 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 SSX1Q16384 188 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 CCDC58Q4VC31 144 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 CCDC36Q8IYA8 594 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 C17orf78Q8N4C9 275 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 FGFBP3Q8TAT2 258 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 RPS4Y2Q8TD47 263 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 RNF166Q96A37 237 aaPredicted RBP8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 WNT5BQ9H1J7 359 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 NIPAL2Q9H841 368 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 ATPIF1Q9UII2 106 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 GRIP1Q9Y3R0 1128 aa8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 KMT2BQ9UMN6 2715 aaPredicted RBP8.96□□□□□ -0.98
VIPAS39-201ENST00000327028 ARPC4-TTLL3A0A0A6YYG9 625 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SMIM31A0A1B0GVY4 71 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 CIB4A0PJX0 185 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 A6NHS1 94 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 A8MXE2 369 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 EEF1E1-BLOC1S5C9J1V9 151 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 CCRL2O00421 344 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 EEF1E1O43324 174 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 DOK2O60496 412 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 HOXB1P14653 301 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 DCTDP32321 178 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ARR3P36575 388 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 PSMB10P40306 273 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 GRB2P62993 217 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 PSG4Q00888 419 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 TLE1Q04724 770 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 TMEM53Q6P2H8 277 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 FDX2Q6P4F2 183 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 RPL22L1Q6P5R6 122 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 BHLHA15Q7RTS1 189 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 LIX1LQ8IVB5 337 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ZFP41Q8N8Y5 198 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 RELL2Q8NC24 303 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 COQ7Q99807 217 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ATF6BQ99941 703 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 NDUFB11Q9NX14 153 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 PLEK2Q9NYT0 353 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 JKAMPQ9P055 326 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SIRT4Q9Y6E7 314 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 NBASA2RRP1 2371 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF503-AS2A6NEH8 195 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 OR6C6A6NF89 314 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 OGG1O15527 345 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SYNGR3O43761 229 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SRSF10O75494 262 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 RPP14O95059 124 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 HLA-HP01893 362 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 PATE4P0C8F1 98 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 CD36P16671 472 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ECH1Q13011 328 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 GPR50Q13585 617 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 CDK5R1Q15078 307 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 TAF13Q15543 124 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF829Q3KNS6 432 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SFRP5Q5T4F7 317 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 LIPKQ5VXJ0 399 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF774Q6NX45 483 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 LUZP2Q86TE4 346 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 PHC2Q8IXK0 858 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 RBM38Q9H0Z9 239 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 RNF121Q9H920 327 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 NOX3Q9HBY0 568 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SLC17A5Q9NRA2 495 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 B3GNT2Q9NY97 397 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms