RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ODF4Q2M2E3 257 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 SFRP5Q5T4F7 317 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 C22orf34Q6ZV56 151 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 OR52N1Q8NH53 320 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 RNF133Q8WVZ7 376 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 CCDC120Q96HB5 630 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 COG8Q96MW5 612 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 BABAM2Q9NXR7 383 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 PLEK2Q9NYT0 353 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 N6AMT1Q9Y5N5 214 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 TMEM14AQ9Y6G1 99 aa13.35□□□□□ -0.27
PRPF3-201ENST00000324862 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 A8MXE2 369 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 CCL2P13500 99 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 JUNBP17275 347 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 COX5AP20674 150 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 OPRM1P35372 400 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 PRKXP51817 358 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 MFGE8Q08431 387 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 INSL4Q14641 139 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 STK11Q15831 433 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 HSPB2Q16082 182 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 GABRA6Q16445 453 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ALKBH2Q6NS38 261 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ZNF367Q7RTV3 350 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 OR13F1Q8NGS4 319 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 MROQ9BYG7 248 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 VCX3AQ9NNX9 186 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 HIVEP3Q5T1R4 2406 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 C5orf63A6NC05 138 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 B8ZZF3 427 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 H3BSA7 217 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 FARS2O95363 451 aaKnown RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 MT-ND5P03915 603 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 KRT8P05787 483 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 CST2P09228 141 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 CELP19835 753 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 OPRL1P41146 370 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 SNTB1Q13884 538 aaKnown RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 RSPO1Q2MKA7 263 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ANKRD16Q6P6B7 361 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 STAC2Q6ZMT1 411 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ZNF627Q7L945 461 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ABHD12BQ7Z5M8 362 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 MYPOPQ86VE0 399 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ZNF679Q8IYX0 411 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 ZNF454Q8N9F8 522 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 CPEB3Q8NE35 698 aaKnown RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 WNT5BQ9H1J7 359 aa13.34□□□□□ -0.27
PRPF3-201ENST00000324862 DIDO1Q9BTC0 2240 aaKnown RBP13.34□□□□□ -0.27
PRPF3-201ENST00000324862 METTL15A6NJ78 407 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 AGFG2O95081 481 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 ACTA2P62736 377 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 ACTG2P63267 376 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 ROM1Q03395 351 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 EGR3Q06889 387 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 PABPC1L2AQ5JQF8 200 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 FOXB2Q5VYV0 432 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 GJC3Q8NFK1 279 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 OR2H1Q9GZK4 316 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 RNF121Q9H920 327 aa13.33□□□□□ -0.27
PRPF3-201ENST00000324862 FLNCQ14315 2725 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 F5H5K5 113 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 DVL2O14641 736 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 H2BFMP0C1H6 154 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 TGFBR2P37173 567 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 RAB1AP62820 205 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 HGFACQ04756 655 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 GPR107Q5VW38 600 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 ARL9Q6T311 187 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 BEND4Q6ZU67 534 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 SYS1Q8N2H4 156 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 RPL3LQ92901 407 aaKnown RBP13.33□□□□□ -0.28
PRPF3-201ENST00000324862 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
PRPF3-201ENST00000324862 MNTQ99583 582 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 PDCD1LG2Q9BQ51 273 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 GTF2A1LQ9UNN4 478 aa13.33□□□□□ -0.28
PRPF3-201ENST00000324862 FAM90A27PA6NNH2 459 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 MSTNO14793 375 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 SGCEO43556 437 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 CNOT4O95628 575 aaKnown RBP13.32□□□□□ -0.28
PRPF3-201ENST00000324862 CELA3BP08861 270 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 RGS6P49758 472 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 HIST1H3AP68431 136 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 SLC3A1Q07837 685 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 HIST2H3PS2Q5TEC6 136 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 KCTD18Q6PI47 426 aaPredicted RBP13.32□□□□□ -0.28
PRPF3-201ENST00000324862 HIST2H3AQ71DI3 136 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 GPR141Q7Z602 305 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 ZNF584Q8IVC4 421 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 RDH10Q8IZV5 341 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 PRSS35Q8N3Z0 413 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 OR13C5Q8NGS8 318 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 ASB17Q8WXJ9 295 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 ST6GALNAC2Q9UJ37 374 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 SLC22A13Q9Y226 551 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms