RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 BIDP55957 195 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 FAM53BQ14153 422 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ZIC1Q15915 447 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ACKR1Q16570 336 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 TRAPPC6BQ86SZ2 158 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ZNF440Q8IYI8 595 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 ELP5Q8TE02 316 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
VARS2-201ENST00000321897 LMF2Q9BU23 707 aaKnown RBP13.84□□□□□ -0.19
VARS2-201ENST00000321897 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
VARS2-201ENST00000321897 A0A087WV62 115 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 MED19A0JLT2 244 aaPredicted RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 IFNA17P01571 189 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 TMEM225BP0DP42 221 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 VAMP2P63027 116 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 RTL10Q7L3V2 364 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 HSD17B11Q8NBQ5 300 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 OR4S1Q8NGB4 309 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 OR1J2Q8NGS2 313 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 LDAHQ9H6V9 325 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ZFP57Q9NU63 452 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 PURGQ9UJV8 347 aaKnown RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 OR4E1P0C645 316 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 CAV2P51636 162 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 CSNK2A1P68400 391 aaPredicted RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 ACY1Q03154 408 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ALKBH1Q13686 389 aaKnown RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 CHRFAM7AQ494W8 412 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 DCXRQ7Z4W1 244 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 OR2L13Q8N349 312 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 EID2Q8N6I1 236 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 CSNK2A3Q8NEV1 391 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 FGGYQ96C11 551 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 SMIM19Q96E16 107 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 WDR90Q96KV7 1748 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 LRRC61Q9BV99 259 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 GAREM1Q9H706 876 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 SMCO4Q9NRQ5 59 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 WBP1LQ9NX94 342 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 MMP17Q9ULZ9 603 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 DOCK7Q96N67 2140 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 TRBV23-1A0A0A0MS06 115 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 BORCS7-ASMTA0A0B4J1R7 106 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 SULT1C2O00338 296 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 DPM1O60762 260 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ZNF217O75362 1048 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ZFPL1O95159 310 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 THBS1P07996 1170 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 HOXD4P09016 255 aaPredicted RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 NPY4RP50391 375 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 NKX6-1P78426 367 aaPredicted RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 HNF4GQ14541 408 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ZNF425Q6IV72 752 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 LINC00518Q8N0U6 118 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 ARHGDIGQ99819 225 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 TINAGL1Q9GZM7 467 aaPredicted RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 FLRT3Q9NZU0 649 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 NDRG3Q9UGV2 375 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 PTRH2Q9Y3E5 179 aaKnown RBP13.83□□□□□ -0.2
VARS2-201ENST00000321897 RNF215Q9Y6U7 377 aa13.83□□□□□ -0.2
VARS2-201ENST00000321897 LOC285556D6RIA3 1793 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 SULT2B1O00204 365 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 SIGLEC6O43699 453 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 PET100P0DJ07 73 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 SSX2Q16385 188 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 PRTGQ2VWP7 1150 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 FAM209BQ5JX69 171 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 DPY19L2P2Q6ZN68 376 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 OR4D10Q8NGI6 311 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 SLC2A12Q8TD20 617 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 ISOC2Q96AB3 205 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 FKRPQ9H9S5 495 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 LYRM4Q9HD34 91 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 CTSFQ9UBX1 484 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 HHLA2Q9UM44 414 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 C7orf66A4D0T2 115 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 PMP2P02689 132 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 TSFMP43897 325 aaKnown RBP13.82□□□□□ -0.2
VARS2-201ENST00000321897 KIAA0141Q14154 515 aaPredicted RBP13.82□□□□□ -0.2
VARS2-201ENST00000321897 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
VARS2-201ENST00000321897 UEVLDQ8IX04 471 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 OR2I1PQ8NGU4 316 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 BANF2Q9H503 90 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 FN3KRPQ9HA64 309 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 PLEK2Q9NYT0 353 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 NUDT21O43809 227 aaKnown RBP13.82□□□□□ -0.2
VARS2-201ENST00000321897 TOMM34Q15785 309 aaPredicted RBP13.82□□□□□ -0.2
VARS2-201ENST00000321897 MDGA2Q7Z553 956 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 CRIPAKQ8N1N5 446 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 OR5H2Q8NGV7 314 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
VARS2-201ENST00000321897 NUBPLQ8TB37 319 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 ZPLD1Q8TCW7 415 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 SLC41A2Q96JW4 573 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 FBXO7Q9Y3I1 522 aa13.82□□□□□ -0.2
VARS2-201ENST00000321897 SCRG1O75711 98 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 GLCEO94923 617 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 DAOP14920 347 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 OMGP23515 440 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms