RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TSPAN4O14817 238 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR2F2O95006 317 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 MPZL1O95297 269 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 NME1P15531 152 aaKnown RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 ATF4P18848 351 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 ABCD3P28288 659 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 CD96P40200 585 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 NR0B1P51843 470 aaKnown RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 CAPZA1P52907 286 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZP2Q05996 745 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 PLCXD2Q0VAA5 305 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 TDGQ13569 410 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR2F1Q13607 317 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 MEF2DQ14814 521 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZMYND11Q15326 602 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 JMJD6Q6NYC1 403 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 PAPD4Q6PIY7 484 aaKnown RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 DEGS2Q6QHC5 323 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 C5orf46Q6UWT4 87 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZNF704Q6ZNC4 412 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 TTLL10Q6ZVT0 673 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 MOB3CQ70IA8 216 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 TMED4Q7Z7H5 227 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 BPIFB2Q8N4F0 458 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 NKAIN3Q8N8D7 197 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR52H1Q8NGJ2 320 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR13C3Q8NGS6 347 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR6S1Q8NH40 331 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 MRGPRFQ96AM1 343 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 SLC38A3Q99624 504 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR11A1Q9GZK7 315 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 MS4A7Q9GZW8 240 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 WDR13Q9H1Z4 485 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 CYB5R1Q9UHQ9 305 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 GPN3Q9UHW5 284 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 METRNQ9UJH8 293 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR52A1Q9UKL2 312 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 PRELID1Q9Y255 219 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 COA3Q9Y2R0 106 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 EMC9Q9Y3B6 208 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 CPED1A4D0V7 1026 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 RNF222A6NCQ9 220 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 TMEM235A6NFC5 223 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 A6NIZ1 184 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 NPIPB13A6NJU9 1138 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 NPIPB4C9JG80 1138 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 TEX46H3BTG2 121 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 RAB27BO00194 218 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR2T1O43869 369 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 AHSA1O95433 338 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 IL2RAP01589 272 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZNF28P17035 718 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZBTB25P24278 435 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 DNASE1L1P49184 302 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 RAP1BP61224 184 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 RAP1AP62834 184 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 SPOCK1Q08629 439 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZP4Q12836 540 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZNF260Q3ZCT1 412 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 VWA2Q5GFL6 755 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 TMEM244Q5VVB8 128 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 HLA-DQA1Q5Y7H0 255 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR10K2Q6IF99 312 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 RAB12Q6IQ22 244 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 FAM122CQ6P4D5 195 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 CORO6Q6QEF8 472 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 SLC25A42Q86VD7 318 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 GKN2Q86XP6 184 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ZNF584Q8IVC4 421 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 PXT1Q8NFP0 134 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR4D6Q8NGJ1 314 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 OR1N1Q8NGS0 311 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 ASB10Q8WXI3 467 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 DAZLQ92904 295 aaKnown RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 FOXRED1Q96CU9 486 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 C12orf4Q9NQ89 552 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 GDF2Q9UK05 429 aaPredicted RBP7.79□□□□□ -1.16
CLK1-201ENST00000321356 FBXO4Q9UKT5 387 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 VSIG4Q9Y279 399 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 GON4LQ3T8J9 2241 aa7.79□□□□□ -1.16
CLK1-201ENST00000321356 USP34Q70CQ2 3546 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 EXPH5Q8NEV8 1989 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 FER1L5A0AVI2 2057 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 A0A1B0GW55 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 OR6C76A6NM76 312 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DISC1C4P0D8 188 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 BCL2L11O43521 198 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 LMX1BO60663 402 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4L2P0CJ85 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4L3P0CJ86 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4L4P0CJ87 422 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4L5P0CJ88 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4L6P0CJ89 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4L7P0CJ90 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 HLA-DOBP13765 273 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 CD34P28906 385 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 MMP16P51512 607 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 QRFPP83859 136 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 C11orf87Q6NUJ2 197 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms