RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GLB1P16278 677 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 S100A11P31949 105 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 SCAND1P57086 179 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 PMPCAQ10713 525 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 CARD17Q5XLA6 110 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 G6PC2Q9NQR9 355 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF230Q9UIE0 474 aaPredicted RBP15.57■□□□□ 0.08
COL9A1-201ENST00000320755 TRBV11-1A0A0K0K1C0 115 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 MBTPS2O43462 519 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 MAP2K6P52564 334 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 ACTBP60709 375 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 ACTG1P63261 375 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 LRRC37A5PQ49AS3 106 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 APCDD1LQ8NCL9 501 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 OR10H5Q8NGA6 315 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 ASB10Q8WXI3 467 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 THRSPQ92748 146 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 PNPLA2Q96AD5 504 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 CXorf58Q96LI9 332 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 TMEM82A0PJX8 343 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 LPLP06858 475 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 SLC2A1P11166 492 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 TAS2R19P59542 299 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 COX15Q7KZN9 410 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 COMMD2Q86X83 199 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF454Q8N9F8 522 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 OR6M1Q8NGM8 313 aa15.56■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF736B4DX44 427 aaPredicted RBP15.55■□□□□ 0.08
COL9A1-201ENST00000320755 C17orf67Q0P5P2 114 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 SLC22A6Q4U2R8 563 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 LIN54Q6MZP7 749 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 ADGRE4PQ86SQ3 457 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 BPIFB2Q8N4F0 458 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 ST7LQ8TDW4 575 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 PTGES2Q9H7Z7 377 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 POLR1DQ9Y2S0 133 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 NUP210LQ5VU65 1888 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 SHOXO15266 292 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 BCAT2O15382 392 aaPredicted RBP15.55■□□□□ 0.08
COL9A1-201ENST00000320755 SPDEFO95238 335 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 OR4E1P0C645 316 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 PRKXP51817 358 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 NR0B2Q15466 257 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 GVQW1Q8N7I0 195 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 CADM4Q8NFZ8 388 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 OR6C1Q96RD1 312 aa15.55■□□□□ 0.08
COL9A1-201ENST00000320755 ADAM10O14672 748 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 RP2O75695 350 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 ACSM4P0C7M7 580 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 IGFBP3P17936 291 aaPredicted RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 MECP2P51608 486 aaKnown RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 GFOD2Q3B7J2 385 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 CDNFQ49AH0 187 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 NHLRC3Q5JS37 347 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 OR52W1Q6IF63 320 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 PAPD4Q6PIY7 484 aaKnown RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 DNM1P34Q6PK57 102 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 OR52N4Q8NGI2 321 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 C11orf40Q8WZ69 217 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 RBPMSQ93062 196 aaKnown RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 PHF7Q9BWX1 381 aaPredicted RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 POTEKPQ9BYX7 375 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 CNTD2Q9H8S5 307 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 KCNN3Q9UGI6 736 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 A0A1W2PNR3 127 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 VSTM2BA6NLU5 285 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 OR6C76A6NM76 312 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 CCSO14618 274 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 CDAP32320 146 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 DAP3P51398 398 aaKnown RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 OR1J2Q8NGS2 313 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 SEC22AQ96IW7 307 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 SLC6A7Q99884 636 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 AUP1Q9Y679 476 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 A6NIZ1 184 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 RAP1BP61224 184 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 RAP1AP62834 184 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 ATXN7L3Q14CW9 347 aaPredicted RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 NKAIN1Q4KMZ8 207 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 ANKRD37Q7Z713 158 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 RTN4RL2Q86UN3 420 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 C12orf45Q8N5I9 185 aaPredicted RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 PLPP5Q8NEB5 264 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 OR13C9Q8NGT0 318 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 NUDCD2Q8WVJ2 157 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 KCNK17Q96T54 332 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 MFFQ9GZY8 342 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 TTYH1Q9H313 450 aaPredicted RBP15.54■□□□□ 0.08
COL9A1-201ENST00000320755 CHST11Q9NPF2 352 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 KLK13Q9UKR3 277 aa15.54■□□□□ 0.08
COL9A1-201ENST00000320755 PI4KAP42356 2102 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 ANKUB1A6NFN9 424 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 EFNA2O43921 213 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 GMFBP60983 142 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 KLHL24Q6TFL4 600 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF704Q6ZNC4 412 aaPredicted RBP15.53■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF584Q8IVC4 421 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 SLAMF6Q96DU3 332 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 DHRS9Q9BPW9 319 aa15.53■□□□□ 0.08
COL9A1-201ENST00000320755 PPP4R1LQ9P1A2 415 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms