RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 LRRC10Q5BKY1 277 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 GDPD1Q8N9F7 314 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 CHPT1Q8WUD6 406 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 C4orf36Q96KX1 117 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 B3GNT2Q9NY97 397 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 UBE2J1Q9Y385 318 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM72A0PK05 275 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ACOD1A6NK06 481 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 CD1AP06126 327 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 DBHP09172 617 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 LIFP15018 202 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 NDUFB7P17568 137 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC2A5P22732 501 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 MXD1Q05195 221 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF181Q2M3W8 571 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 PLET1Q6UQ28 207 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 NUFIP2Q7Z417 695 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 CD163Q86VB7 1156 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 OR6X1Q8NH79 312 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 AKR1E2Q96JD6 320 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM68Q96MH6 324 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 SCNM1Q9BWG6 230 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 BARHL1Q9BZE3 327 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC22A11Q9NSA0 550 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ASCC3Q8N3C0 2202 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 PRSS44E7EML9 344 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 BGLAPP02818 100 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 FGF9P31371 208 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 Q499Y3 187 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ADGRG3Q86Y34 549 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM203Q969S6 136 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 TMIGD2Q96BF3 282 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 PLA2G12AQ9BZM1 189 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF355PQ9NSJ1 428 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 B9D1Q9UPM9 204 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 KLF4O43474 513 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 DXOO77932 396 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 SP1P08047 785 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ACHEP22303 614 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 EPHA2P29317 976 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 PPP5CP53041 499 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 AP2S1P53680 142 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 GNMTQ14749 295 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC25A53Q5H9E4 307 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 NOXA1Q86UR1 476 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF391Q9UJN7 358 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 LIPT2A6NK58 231 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 H7C417 338 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF593O00488 134 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ENSAO43768 121 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF780AO75290 641 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 ACSM3Q53FZ2 586 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 CLEC2AQ6UVW9 174 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 OR5H2Q8NGV7 314 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 TAAR8Q969N4 342 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 KTI12Q96EK9 354 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 KCNE5Q9UJ90 142 aa7.68□□□□□ -1.18
PDLIM5-201ENST00000317968 LRRK1Q38SD2 2015 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 LRRN3E7EW58 273 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TGFBR3LH3BV60 316 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 PLPP3O14495 311 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 CTSBP07858 339 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 CCR9P51686 369 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 BCL2A1Q16548 175 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 C4orf46Q504U0 113 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 WIPI1Q5MNZ9 446 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 C22orf42Q6IC83 251 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 UNQ6494/PRO21346Q6UXR6 183 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 PHC2Q8IXK0 858 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF679Q8IYX0 411 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TOMM5Q8N4H5 51 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 OR5M1Q8NGP8 315 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TECTBQ96PL2 329 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 SORCS2Q96PQ0 1159 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 C20orf141Q9NUB4 165 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 FKBP14Q9NWM8 211 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 COMMD3Q9UBI1 195 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC34A2O95436 690 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 IGHA1P01876 353 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 APOA2P02652 100 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 OR4K15Q8NH41 348 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 YIPF6Q96EC8 236 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 DCLRE1CQ96SD1 692 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 DIRC2Q96SL1 478 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 DOK1Q99704 481 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 FUZQ9BT04 418 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 SLCO5A1Q9H2Y9 848 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 LY6G6EA0A0G2JKS1 128 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 LRP5LA4QPB2 252 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 C16orf97H3BN30 126 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 NDUFB3O43676 98 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TSC22D2O75157 780 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 FABP1P07148 127 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 HNRNPCP07910 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 RFC3P40938 356 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 HNRNPA0Q13151 305 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 ALKBH1Q13686 389 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TP53I3Q53FA7 332 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 ANKRD34AQ69YU3 496 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms