RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 AQP2P41181 271 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 RAB5BP61020 215 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 INSM1Q01101 510 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 BDH1Q02338 343 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 CDNFQ49AH0 187 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 ARHGAP11AQ6P4F7 1023 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 POMZP3Q6PJE2 187 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 SLC43A2Q8N370 569 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 OR52E2Q8NGJ4 325 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 SMAP2Q8WU79 429 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 RASD2Q96D21 266 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 GPX7Q96SL4 187 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 TEAD3Q99594 435 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 EGLN1Q9GZT9 426 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 OR51V1Q9H2C8 321 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 MYOTQ9UBF9 498 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 C19orf25Q9UFG5 118 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 RPH3AQ9Y2J0 694 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-201ENST00000317677 HIF3AQ9Y2N7 669 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 LOXL2Q9Y4K0 774 aa11.72□□□□□ -0.53
CPNE1-201ENST00000317677 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM72A0PK05 275 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 RIIAD1A6NNX1 92 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 MASP2O00187 686 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 OR2J2O76002 312 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 ZFAND5O76080 213 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 BGLAPP02818 100 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 KLK3P07288 261 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 UBBP0CG47 229 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 UBCP0CG48 685 aaKnown RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 RPA2P15927 270 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 PGCP20142 388 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 GMFBP60983 142 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 RPS27AP62979 156 aaKnown RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 UBA52P62987 128 aaKnown RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 CBFBQ13951 182 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 TMEM88Q6PEY1 159 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 DPY19L2P2Q6ZN68 376 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 TIPARPQ7Z3E1 657 aaKnown RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 IMMP1LQ96LU5 166 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 PLEKHA1Q9HB21 404 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 KLHL1Q9NR64 748 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 H2AFY2Q9P0M6 372 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 NXT1Q9UKK6 140 aaKnown RBP11.71□□□□□ -0.53
CPNE1-201ENST00000317677 CAMK2AQ9UQM7 478 aa11.71□□□□□ -0.53
CPNE1-201ENST00000317677 OR6C68A6NDL8 312 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CDC40O60508 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 NPIPB7O75200 414 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 NUDT14O95848 222 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CD3GP09693 182 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 MGMTP16455 207 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CCR9P51686 369 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CAPZA1P52907 286 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 SNRPEP62304 92 aaKnown RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF626Q68DY1 528 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 OR7E24Q6IFN5 339 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 LRRN1Q6UXK5 716 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RHOUQ7L0Q8 258 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 ZFP41Q8N8Y5 198 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 NPEPL1Q8NDH3 523 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 OR2Y1Q8NGV0 311 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CMKLR1Q99788 373 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 TMED9Q9BVK6 235 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 ADGRL4Q9HBW9 690 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CA10Q9NS85 328 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 TAS2R10Q9NYW0 307 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 TREM2Q9NZC2 230 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 SDK2Q58EX2 2172 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 TMED7-TICAM2A0A0A6YYA0 188 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 GPR31O00270 319 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 ARPC3O15145 178 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RGS9O75916 674 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 MRPL3P09001 348 aaKnown RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 GP1BBP13224 206 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CD53P19397 219 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 DLX5P56178 289 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 FOXC1Q12948 553 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 CDCP2Q5VXM1 449 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RBMS3Q6XE24 437 aaKnown RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RFLNBQ8N5W9 214 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 OR10G3Q8NGC4 313 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 OR5L2Q8NGL0 311 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 THAP6Q8TBB0 222 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 SPRYD4Q8WW59 207 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RELTQ969Z4 430 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 PHYHIPLQ96FC7 376 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 Q96M85 177 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 RASL10BQ96S79 203 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 TBX5Q99593 518 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms