RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ARL2BPQ9Y2Y0 163 aa15.09■□□□□ 0.01
TPM1-203ENST00000317516 WIPI2Q9Y4P8 454 aa15.09■□□□□ 0.01
TPM1-203ENST00000317516 V9GYQ6 96 aa15.09■□□□□ 0.01
TPM1-203ENST00000317516 DNHD1Q96M86 4753 aa15.08■□□□□ 0.01
TPM1-203ENST00000317516 ZSCAN5BA6NJL1 495 aa15.08■□□□□ 0
TPM1-203ENST00000317516 IMPA2O14732 288 aa15.08■□□□□ 0
TPM1-203ENST00000317516 DCTN3O75935 186 aa15.08■□□□□ 0
TPM1-203ENST00000317516 CD55P08174 381 aa15.08■□□□□ 0
TPM1-203ENST00000317516 SLC6A6P31641 620 aa15.08■□□□□ 0
TPM1-203ENST00000317516 CENPAP49450 140 aa15.08■□□□□ 0
TPM1-203ENST00000317516 RGS6P49758 472 aa15.08■□□□□ 0
TPM1-203ENST00000317516 MNAT1P51948 309 aa15.08■□□□□ 0
TPM1-203ENST00000317516 KCNMB1Q16558 191 aa15.08■□□□□ 0
TPM1-203ENST00000317516 RFX4Q33E94 735 aa15.08■□□□□ 0
TPM1-203ENST00000317516 C16orf89Q6UX73 402 aa15.08■□□□□ 0
TPM1-203ENST00000317516 JAZF1Q86VZ6 243 aa15.08■□□□□ 0
TPM1-203ENST00000317516 OR5L1Q8NGL2 311 aa15.08■□□□□ 0
TPM1-203ENST00000317516 OR1F12Q8NHA8 337 aa15.08■□□□□ 0
TPM1-203ENST00000317516 PTP4A1Q93096 173 aa15.08■□□□□ 0
TPM1-203ENST00000317516 ERMAPQ96PL5 475 aaPredicted RBP15.08■□□□□ 0
TPM1-203ENST00000317516 DCLRE1CQ96SD1 692 aaKnown RBP15.08■□□□□ 0
TPM1-203ENST00000317516 MSL2Q9HCI7 577 aa15.08■□□□□ 0
TPM1-203ENST00000317516 CD300AQ9UGN4 299 aa15.08■□□□□ 0
TPM1-203ENST00000317516 ATPIF1Q9UII2 106 aa15.08■□□□□ 0
TPM1-203ENST00000317516 J3QW42 95 aa15.07■□□□□ 0
TPM1-203ENST00000317516 OR10H3O60404 316 aa15.07■□□□□ 0
TPM1-203ENST00000317516 UBOX5O94941 541 aa15.07■□□□□ 0
TPM1-203ENST00000317516 MPZL1O95297 269 aa15.07■□□□□ 0
TPM1-203ENST00000317516 RENP00797 406 aa15.07■□□□□ 0
TPM1-203ENST00000317516 FABP3P05413 133 aa15.07■□□□□ 0
TPM1-203ENST00000317516 TNFRSF1AP19438 455 aa15.07■□□□□ 0
TPM1-203ENST00000317516 NOS3P29474 1203 aa15.07■□□□□ 0
TPM1-203ENST00000317516 CDKN2AP42771 156 aaKnown RBP15.07■□□□□ 0
TPM1-203ENST00000317516 GNGT1P63211 74 aa15.07■□□□□ 0
TPM1-203ENST00000317516 MXRA7P84157 204 aa15.07■□□□□ 0
TPM1-203ENST00000317516 TNFAIP6P98066 277 aaPredicted RBP15.07■□□□□ 0
TPM1-203ENST00000317516 CDK5R2Q13319 367 aa15.07■□□□□ 0
TPM1-203ENST00000317516 GJC3Q8NFK1 279 aa15.07■□□□□ 0
TPM1-203ENST00000317516 FANK1Q8TC84 345 aa15.07■□□□□ 0
TPM1-203ENST00000317516 HAVCR1Q96D42 359 aa15.07■□□□□ 0
TPM1-203ENST00000317516 CMBLQ96DG6 245 aa15.07■□□□□ 0
TPM1-203ENST00000317516 GAL3ST1Q99999 423 aa15.07■□□□□ 0
TPM1-203ENST00000317516 FUZQ9BT04 418 aa15.07■□□□□ 0
TPM1-203ENST00000317516 C19orf24Q9BVV8 132 aa15.07■□□□□ 0
TPM1-203ENST00000317516 PURGQ9UJV8 347 aaKnown RBP15.07■□□□□ 0
TPM1-203ENST00000317516 STARD10Q9Y365 291 aa15.07■□□□□ 0
TPM1-203ENST00000317516 CACNG2Q9Y698 323 aa15.07■□□□□ 0
TPM1-203ENST00000317516 OR6C6A6NF89 314 aa15.06■□□□□ 0
TPM1-203ENST00000317516 ARPC2O15144 300 aa15.06■□□□□ 0
TPM1-203ENST00000317516 ARPC3O15145 178 aa15.06■□□□□ 0
TPM1-203ENST00000317516 SURF4O15260 269 aa15.06■□□□□ 0
TPM1-203ENST00000317516 IDH3BO43837 385 aa15.06■□□□□ 0
TPM1-203ENST00000317516 PPP1R3DO95685 299 aa15.06■□□□□ 0
TPM1-203ENST00000317516 SEMG1P04279 462 aa15.06■□□□□ 0
TPM1-203ENST00000317516 KITLGP21583 273 aa15.06■□□□□ 0
TPM1-203ENST00000317516 FPR3P25089 353 aa15.06■□□□□ 0
TPM1-203ENST00000317516 FXYD6P3P58550 94 aa15.06■□□□□ 0
TPM1-203ENST00000317516 TMEM255AQ5JRV8 349 aa15.06■□□□□ 0
TPM1-203ENST00000317516 C1orf94Q6P1W5 598 aa15.06■□□□□ 0
TPM1-203ENST00000317516 PTCHD4Q6ZW05 846 aa15.06■□□□□ 0
TPM1-203ENST00000317516 PIGWQ7Z7B1 504 aa15.06■□□□□ 0
TPM1-203ENST00000317516 GPA33Q99795 319 aa15.06■□□□□ 0
TPM1-203ENST00000317516 IFT27Q9BW83 186 aa15.06■□□□□ 0
TPM1-203ENST00000317516 OR52D1Q9H346 318 aa15.06■□□□□ 0
TPM1-203ENST00000317516 OCEL1Q9H607 264 aa15.06■□□□□ 0
TPM1-203ENST00000317516 METTL17Q9H7H0 456 aaPredicted RBP15.06■□□□□ 0
TPM1-203ENST00000317516 SRA1Q9HD15 236 aaKnown RBP15.06■□□□□ 0
TPM1-203ENST00000317516 IL1RAPQ9NPH3 570 aa15.06■□□□□ 0
TPM1-203ENST00000317516 A0A0A6YYJ9 748 aa15.05■□□□□ -0
TPM1-203ENST00000317516 A0A0G2JMP0 313 aa15.05■□□□□ -0
TPM1-203ENST00000317516 A0A0X1KG70 313 aa15.05■□□□□ -0
TPM1-203ENST00000317516 ISPDA4D126 451 aa15.05■□□□□ -0
TPM1-203ENST00000317516 RER1O15258 196 aa15.05■□□□□ -0
TPM1-203ENST00000317516 PLPP2O43688 288 aa15.05■□□□□ -0
TPM1-203ENST00000317516 KRT36O76013 467 aa15.05■□□□□ -0
TPM1-203ENST00000317516 PNPP00491 289 aa15.05■□□□□ -0
TPM1-203ENST00000317516 IGHV2-5P01817 119 aa15.05■□□□□ -0
TPM1-203ENST00000317516 RAC2P15153 192 aa15.05■□□□□ -0
TPM1-203ENST00000317516 RRM2P31350 389 aa15.05■□□□□ -0
TPM1-203ENST00000317516 MSX2P35548 267 aaPredicted RBP15.05■□□□□ -0
TPM1-203ENST00000317516 SLC36A3Q495N2 470 aa15.05■□□□□ -0
TPM1-203ENST00000317516 CCDC92Q53HC0 331 aaPredicted RBP15.05■□□□□ -0
TPM1-203ENST00000317516 LEG1Q6P5S2 330 aa15.05■□□□□ -0
TPM1-203ENST00000317516 DEFB107AQ8IZN7 70 aa15.05■□□□□ -0
TPM1-203ENST00000317516 OR2Z1Q8NG97 314 aa15.05■□□□□ -0
TPM1-203ENST00000317516 OR4M2Q8NGB6 313 aa15.05■□□□□ -0
TPM1-203ENST00000317516 GNPDA2Q8TDQ7 276 aa15.05■□□□□ -0
TPM1-203ENST00000317516 SAMD8Q96LT4 415 aa15.05■□□□□ -0
TPM1-203ENST00000317516 CDADC1Q9BWV3 514 aa15.05■□□□□ -0
TPM1-203ENST00000317516 HDHD2Q9H0R4 259 aa15.05■□□□□ -0
TPM1-203ENST00000317516 ARL8BQ9NVJ2 186 aa15.05■□□□□ -0
TPM1-203ENST00000317516 B9D1Q9UPM9 204 aa15.05■□□□□ -0
TPM1-203ENST00000317516 J3QLI3 93 aa15.04■□□□□ -0
TPM1-203ENST00000317516 DEAF1O75398 565 aaPredicted RBP15.04■□□□□ -0
TPM1-203ENST00000317516 GATA3P23771 443 aa15.04■□□□□ -0
TPM1-203ENST00000317516 SLC27A4Q6P1M0 643 aa15.04■□□□□ -0
TPM1-203ENST00000317516 ZDHHC21Q8IVQ6 265 aa15.04■□□□□ -0
TPM1-203ENST00000317516 LINC00471Q8N535 108 aa15.04■□□□□ -0
TPM1-203ENST00000317516 ST7LQ8TDW4 575 aa15.04■□□□□ -0
TPM1-203ENST00000317516 SLC7A6Q92536 515 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms