RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 FAM122BQ7Z309 247 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 TSEN54Q7Z6J9 526 aaKnown RBP14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 SLC15A3Q8IY34 581 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 BCL6BQ8N143 479 aaPredicted RBP14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 POU5F2Q8N7G0 328 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 FAM156AQ8NDB6 213 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 NPEPL1Q8NDH3 523 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 ITLN1Q8WWA0 313 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 RCN3Q96D15 328 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 WACQ9BTA9 647 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 NTN4Q9HB63 628 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 DDX28Q9NUL7 540 aaKnown RBP14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 MRGBPQ9NV56 204 aa14.69□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF682O95780 498 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF12P17014 697 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 TUBG1P23258 451 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 TNFSF4P23510 183 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 BTG1P62324 171 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 SCRN3Q0VDG4 424 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 ZBED5Q49AG3 693 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 TMEM155Q4W5P6 130 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 C1orf94Q6P1W5 598 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 KLHL36Q8N4N3 616 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 SPICQ8N5J4 248 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 POP5Q969H6 163 aaKnown RBP14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 RASD2Q96D21 266 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 TUBG2Q9NRH3 451 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 ARMCX1Q9P291 453 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 IL19Q9UHD0 177 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 NUP50Q9UKX7 468 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 PPP1R3CQ9UQK1 317 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 PCDHGB1Q9Y5G3 927 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 INSIG2Q9Y5U4 225 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 AUP1Q9Y679 476 aa14.68□□□□□ -0.06
EXOSC4-201ENST00000316052 TGP01266 2768 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 TEX13CA0A0J9YWL9 993 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 OR6C6A6NF89 314 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 F5H0A9 414 aaPredicted RBP14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 CXCR6O00574 342 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 XKRYO14609 159 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 AHCYL1O43865 530 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 PTP4A3O75365 173 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 DBHP09172 617 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 HKR1P10072 659 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 TNFRSF1AP19438 455 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 LIPEQ05469 1076 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 HLXQ14774 488 aaPredicted RBP14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 CCDC92Q53HC0 331 aaPredicted RBP14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 CBLL1Q75N03 491 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 DOK3Q7L591 496 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 PTP4A1Q93096 173 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 C1orf147Q96MC9 270 aaPredicted RBP14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF48Q96MX3 618 aaPredicted RBP14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF570Q96NI8 536 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 OR2V2Q96R30 315 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 PLEK2Q9NYT0 353 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 COA3Q9Y2R0 106 aaPredicted RBP14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 CAPN7Q9Y6W3 813 aa14.67□□□□□ -0.06
EXOSC4-201ENST00000316052 TMEM178BH3BS89 294 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 SLC16A7O60669 478 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 AQP6Q13520 282 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 IFI44LQ53G44 452 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 ARMCX4Q5H9R4 360 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 RBMS3Q6XE24 437 aaKnown RBP14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 OR5AS1Q8N127 324 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 OR1F12Q8NHA8 337 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 SLC7A13Q8TCU3 470 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 HSH2DQ96JZ2 352 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF747Q9BV97 191 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 SYT4Q9H2B2 425 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 RERGLQ9H628 205 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 NMNAT1Q9HAN9 279 aaPredicted RBP14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 GCM1Q9NP62 436 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 ASH2LQ9UBL3 628 aa14.66□□□□□ -0.06
EXOSC4-201ENST00000316052 DNAJC9-AS1A6NH13 148 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 A8MXK9 166 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 NME4O00746 187 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 RER1O15258 196 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF205O95201 554 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 SERPINA1P01009 418 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 WNT2P09544 360 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 RAC2P15153 192 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 PRTN3P24158 256 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 CD80P33681 288 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 MMP16P51512 607 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 PAX8Q06710 450 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 KRR1Q13601 381 aaKnown RBP14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 PTCHD4Q6ZW05 846 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 FKBP9P1Q75LS8 142 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 GLB1L2Q8IW92 636 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 ATG16L2Q8NAA4 619 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 ZNF420Q8TAQ5 688 aaPredicted RBP14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 FAM46AQ96IP4 442 aaKnown RBP14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 NRIP3Q9NQ35 241 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 IL20RAQ9UHF4 553 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 SIGLEC7Q9Y286 467 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 AP3M1Q9Y2T2 418 aa14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 SOX21Q9Y651 276 aaPredicted RBP14.65□□□□□ -0.06
EXOSC4-201ENST00000316052 CEACAM18A8MTB9 384 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms