RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PARGQ86W56 976 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 ARMC10Q8N2F6 343 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 ZNF321PQ8N8H1 164 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 ASB17Q8WXJ9 295 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 FGF14Q92915 247 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 CMKLR1Q99788 373 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SZT2Q5T011 3432 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 LOC100509620A0A075B734 347 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 CPED1A4D0V7 1026 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SULT2B1O00204 365 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 XKRYO14609 159 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 LDLRAD4O15165 306 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 WISP1O95388 367 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 UTS2O95399 124 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 CD37P11049 281 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 ZBTB25P24278 435 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 CASRP41180 1078 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PNLIPRP2P54317 469 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 ROM1Q03395 351 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 CCINQ13939 588 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 ZNF542PQ5EBM4 170 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PARM1Q6UWI2 310 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 METTL27Q8N6F8 245 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 FRMD1Q8N878 549 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 MRGPRFQ96AM1 343 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 C8orf44Q96CB5 159 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SLC25A44Q96H78 314 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 ADAM19Q9H013 955 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SEMA6CQ9H3T2 930 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PRSS37A4D1T9 235 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 FAM25EA8MYX2 175 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SLC16A7O60669 478 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 CD2P06729 351 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SPOCK1Q08629 439 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 TOMM34Q15785 309 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 PAPD4Q6PIY7 484 aaKnown RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 RBMS3Q6XE24 437 aaKnown RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 ADGRE4PQ86SQ3 457 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 ZNF587Q96SQ5 575 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 CST11Q9H112 138 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 KIF26BQ2KJY2 2108 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 TRAV20A0A0B4J274 112 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 WIPF3A6NGB9 483 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 BGLAPP02818 100 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 RORAP35398 523 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 VEGFBP49765 207 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 CXADRP78310 365 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 INSM1Q01101 510 aaPredicted RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 ELOCQ15369 112 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 Q6ZSR6 202 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 SLC25A42Q86VD7 318 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 CATSPERDQ86XM0 798 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 SPAG16Q8N0X2 631 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 GPBAR1Q8TDU6 330 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 METTL21AQ8WXB1 218 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 NXF5Q9H1B4 397 aaKnown RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 PRODH2Q9UF12 536 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 TMED7Q9Y3B3 224 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 OR2AT4A6NND4 320 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 OR6A2O95222 327 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 IL33O95760 270 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 CBR1P16152 277 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 CTLA4P16410 223 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 HLA-GP17693 338 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 AVPR2P30518 371 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 ADAM8P78325 824 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 PDZK1IP1Q13113 114 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 ACKR1Q16570 336 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 RHOUQ7L0Q8 258 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 NUP54Q7Z3B4 507 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 LYG2Q86SG7 212 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 ZNF584Q8IVC4 421 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 JAGN1Q8N5M9 183 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 C19orf47Q8N9M1 422 aaKnown RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 ACBD4Q8NC06 268 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 OR4A4PQ8NGN8 299 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 ABHD6Q9BV23 337 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 DHCR7Q9UBM7 475 aaKnown RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 ZNF107Q9UII5 783 aaPredicted RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 TMEM184BQ9Y519 407 aaPredicted RBP12.06□□□□□ -0.48
SKA3-202ENST00000314759 LRP12Q9Y561 859 aa12.06□□□□□ -0.48
SKA3-202ENST00000314759 IGLV1-36A0A0B4J1U3 117 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 FSTP19883 344 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 PTGFRP43088 359 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 RIDAP52758 137 aaKnown RBP12.05□□□□□ -0.48
SKA3-202ENST00000314759 SNRPEP62304 92 aaKnown RBP12.05□□□□□ -0.48
SKA3-202ENST00000314759 SQSTM1Q13501 440 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 CDNFQ49AH0 187 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 PRAMEF17Q5VTA0 474 aa12.05□□□□□ -0.48
SKA3-202ENST00000314759 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms