RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SNX3O60493 162 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 ICMTO60725 284 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 HLA-DQA2P01906 255 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 ADH4P08319 380 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 CTLA4P16410 223 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 GATA3P23771 443 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 RRM2P31350 389 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 OMPP47874 163 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 LMO4P61968 165 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 PSG7Q13046 419 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 RFX4Q33E94 735 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 KRTAP24-1Q3LI83 254 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 DCAF12L2Q5VW00 463 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 FAM122BQ7Z309 247 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 KLHL36Q8N4N3 616 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 LINC00471Q8N535 108 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 ATG16L2Q8NAA4 619 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 OR2AJ1Q8NGZ0 328 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 OR1F12Q8NHA8 337 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 RASD2Q96D21 266 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 GPX7Q96SL4 187 aaPredicted RBP10.79□□□□□ -0.68
CKS2-201ENST00000314355 IFT27Q9BW83 186 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 NUAK2Q9H093 628 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 SRA1Q9HD15 236 aaKnown RBP10.79□□□□□ -0.68
CKS2-201ENST00000314355 UBAP1Q9NZ09 502 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 VSX1Q9NZR4 365 aaPredicted RBP10.79□□□□□ -0.68
CKS2-201ENST00000314355 ASH2LQ9UBL3 628 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 IL20RAQ9UHF4 553 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 TAGLN3Q9UI15 199 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 PURGQ9UJV8 347 aaKnown RBP10.79□□□□□ -0.68
CKS2-201ENST00000314355 ARL2BPQ9Y2Y0 163 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 V9GYQ6 96 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 ATRQ13535 2644 aa10.79□□□□□ -0.68
CKS2-201ENST00000314355 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.684e-17■■■■□ 26.7
CKS2-201ENST00000314355 J3QLI3 93 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 IFNL4K9M1U5 179 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 PLPP2O43688 288 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 IDH3BO43837 385 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 KRT36O76013 467 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 DIRAS1O95057 198 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 CD55P08174 381 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 SBK2P0C263 348 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 HSD17B1P14061 328 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 RAC2P15153 192 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 FHL1Q13642 323 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 SPATS1Q496A3 300 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 RFPL4BQ6ZWI9 263 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 VASH1Q7L8A9 365 aaPredicted RBP10.78□□□□□ -0.68
CKS2-201ENST00000314355 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.78□□□□□ -0.68
CKS2-201ENST00000314355 SPICQ8N5J4 248 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 NANPQ8TBE9 248 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 FANK1Q8TC84 345 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 GNPDA2Q8TDQ7 276 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
CKS2-201ENST00000314355 HAVCR1Q96D42 359 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 SAMD8Q96LT4 415 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 ZNF582Q96NG8 517 aaPredicted RBP10.78□□□□□ -0.68
CKS2-201ENST00000314355 IL19Q9UHD0 177 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 ATPIF1Q9UII2 106 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 KLHL21Q9UJP4 597 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 NPTNQ9Y639 398 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
CKS2-201ENST00000314355 TRBV4-1A0A0J9YWV2 114 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 ZSCAN5BA6NJL1 495 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 WNT9BO14905 357 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 FOXH1O75593 365 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 TXNDC12O95881 172 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 ZNF823P16415 610 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 SELEP16581 610 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 KITLGP21583 273 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 FUT4P22083 530 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 FPR2P25090 351 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 LIMS1P48059 325 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 GNGT1P63211 74 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 CDK5R2Q13319 367 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 RPL13AP3Q6NVV1 102 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 THSD4Q6ZMP0 1018 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 OR13G1Q8NGZ3 307 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 POP5Q969H6 163 aaKnown RBP10.77□□□□□ -0.69
CKS2-201ENST00000314355 C7orf34Q96L11 122 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 HCAR1Q9BXC0 346 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 HDHD2Q9H0R4 259 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 OR52D1Q9H346 318 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 C7orf69Q9H7B7 122 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 PPP1R3CQ9UQK1 317 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 STARD10Q9Y365 291 aa10.77□□□□□ -0.69
CKS2-201ENST00000314355 LRRC30A6NM36 301 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 TRIM77I1YAP6 450 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 ARPC3O15145 178 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 RER1O15258 196 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 UBOX5O94941 541 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 PPP1R3DO95685 299 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 IGHV2-5P01817 119 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 SCG5P05408 212 aa10.76□□□□□ -0.69
CKS2-201ENST00000314355 FPR3P25089 353 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms